Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | CFLSLDACKEATNDCSGHGTCVNKFGTGNATSSDARACFACKCMATVVRRGDEPGTSGKKTVHWGGNMCQKKDVSVPFWLITGFTITIVGAVTFAIGLLFSVGQEQLPGVIGA |
1 | 6bmsA | 0.09 | 0.05 | 0.59 | 0.70 | DisCoVER | | AIFTP--PS-TPPDRCETCVLKMDHH-----SPWVNNCVGFSNYKFFLLFGEHKKLWFIPVFTSGHYFP-------------------------------------LRTLRE- |
2 | 6drjA | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | ------SEEVRHLLG---SFT-----AIFHAQKLLRITWLLEAKDLWILLSIFIIFCLRAISRTL---GP-IIIVRRMMLDLFFFMFLLSIWVVAYGVAKQGILLTMLCVYLL |
3 | 5zb9A | 0.14 | 0.14 | 1.00 | 0.56 | CEthreader | | LGDSLAKVLPTGVKVTIRHISSAPSPCVAPPGEEPESTFCENHFLAVSISPNENEESEVIIFGIEVLVYSKADSTGYLHLLKNAPKVSLLRLISNAFLSFLVQTHQRPGVRLM |
4 | 4dj2A | 0.06 | 0.05 | 0.87 | 0.60 | EigenThreader | | LAPQDVGVFYGSTTPSRLSVFCRIRGG--------RYQPFRLTPYVTKIRV----APAQPCCLLIA---ERIHSGYPLLGQDLLLLFLEDRPLMLAIHKKILQLAGQPFDHSP |
5 | 6xbws | 0.12 | 0.09 | 0.72 | 0.44 | HHpred | | -----------------------YFN-ASQVTGPSIYSFHCEHVSSENEDGNVPTQPSLWQMTFRASDCA-GFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMD------- |
6 | 4k0eA | 0.16 | 0.06 | 0.40 | 0.47 | MRFsearch | | ----------------------------------------------------------HIQVAWGGQFENQQRAQARLAVILPMVLALMFVLLGGLVALHLRG---------- |
7 | 2pe4A2 | 0.33 | 0.15 | 0.45 | 0.39 | FFAS-3D | | ----ALLCSQAL--CSGHGRCVRRTSHPKALLLLNPASFKCRCYPG-----------------WQAPWCERKSM--------------------------------------- |
8 | 5yfpD | 0.10 | 0.09 | 0.93 | 0.83 | SPARKS-K | | VLWILNWLPGLKKAINID--EVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPNSLGNLKIL------LDDKASKKFDETIDGFKTLKFKLITILRFNIRALQNTKIWNMDV |
9 | 7a23M | 0.08 | 0.03 | 0.35 | 0.63 | CNFpred | | --------------------------------------------------------------------------GGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGL |
10 | 5khnB | 0.08 | 0.06 | 0.79 | 0.83 | DEthreader | | PSLA--DADAAAKRLDAVRTTTLLVRDWV------DGKALVQISPKVPKG------VDPDMLFAVKEGAIGIILSANTIISAFLHAALWSIISITILLWITRR---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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