Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DYADELYEEILSSLSKKDGEEGTNYDDKYNDFKKEYDMFISLSKDEYEIIGKLIDAFSMYNDGINEDADSVYEAIKKSFTDPKFKQEFKDFMNGIYSYAERKHHIRGAQTEQAKTYLMLFQNVYN |
1 | 4widA1 | 0.06 | 0.05 | 0.79 | 0.70 | DisCoVER | | MALQHAVDLLIKAHLVVTQIKLRVNRKVFSDKFEKLEQGIQSKDDIKDRVTYTCMKYFFQLYDDLTDANHDGLELIKKLD----VTTLGMALYKE--GHQKNEAM-------------------- |
2 | 6rohA3 | 0.04 | 0.03 | 0.86 | 0.83 | DEthreader | | KYKFFQEFSK--YANLFFTTTLLVVLIVSAMKECIEDIKRATP---IKRT-AVEKIINRQI--IALFLVP-ISLFV-TV----EL-IK-YYQASSLVEELIQAHVGV-LLLHGSWSYQRISVAIY |
3 | 5jr9A | 0.09 | 0.09 | 1.00 | 0.44 | CEthreader | | KLSKSLIYSMIREDYKSADKYKEELTNLAKTQIEELKKYPMFYGFIGLQEYVEALALYYYIKENRIPGDIAGEILRKSSENIEYAKKAKQDLESLYLDLLYIELKNFDLRRKLDYVSNIINKLIE |
4 | 2qr4A1 | 0.07 | 0.06 | 0.88 | 0.75 | EigenThreader | | --------LSDQEFDEKYLELSEELKQS----EKHKGTLDQGASQFLNAIEFVYVYAHLKNDQDTYQALYARASSLFSKV---SEAVSWFEPEILIWQYFKEEPKLEVYRHYIQQIVDQESLLAG |
5 | 1vt4I3 | 0.12 | 0.09 | 0.72 | 0.34 | HHpred | | LDFRFLEQKIRHDSTAWNASGSILNTLQQ---LKFYKPYICDNDPKYERLVNAILDFLPKI-EENLICSKYTDLLRIALMAEDEA-IFEEAHKQV------------------------------ |
6 | 4uvjA1 | 0.16 | 0.14 | 0.86 | 0.43 | MRFsearch | | --VLPLFYDLLNA---------------ASILCPLLESFITFSETELKKITDKTIKAFMDSTIGNSKVDMKYDIFAKFIHHEKFLNQIATLKIHLKKFLQEKMDPNNSRDDYKDLTCSLYELYIN |
7 | 2ooeA1 | 0.10 | 0.08 | 0.79 | 0.62 | FFAS-3D | | ----DAWSILIREAQNQP----------IDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKN-----YDKVEKLFQRCLMKVLHIDLWKCYL----SYVRETK---GKLPSYKEKMAQAYDFALD |
8 | 4uosA | 0.11 | 0.11 | 1.00 | 0.60 | SPARKS-K | | KKVKEMLEKMIKEIKKENGEDSEKILKKAKEMAEKILKMIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILK |
9 | 5vchA | 0.14 | 0.13 | 0.94 | 0.55 | CNFpred | | DVALDIYVALSTNLVG-------GFAQVFTTAKPVILQLCQSSKNKRSFAVGALSEIALGMRDENPFIQELLEALIISLTNDKSLEVRCNASYGVGLLIEYSSDVSAIYSPVLKSLYEILSVADE |
10 | 5t49A | 0.06 | 0.05 | 0.80 | 0.83 | DEthreader | | ----SVGKGS--YA-TEF-PPQTNS-----------VLSATAAEQFRGELKDILEDWQATNASGQLKGKNLFYLGYASAIND-HHFHYG-YFVKAAAEIARAD--QE-WAKSWGGI-DLLIRDFR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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