Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RTNSDSALHTSAMNPNPQDPFGMNQQMGRGPPQRNASMNEAEVDSSGDVFSFPAVPNEENLLGVNKPMPKQLWEAKKVQSLSSRPKSCEVPGINIFPSPEQNAGLSHYQGTLNTGGSLPDLSNLHFPSPLPTPLDPDEAGYPNLSGGSSTGNLPAAMMHLGIGNS |
1 | 2pffB | 0.21 | 0.10 | 0.47 | 1.08 | MRFsearch | | ---------------NPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------------------------------GGGGGGGGGGGGGGGGGGGG-------------------GGGGGGGGGGGGGGGGQGSQEQ------ |
2 | 5lj3W | 0.09 | 0.07 | 0.78 | 1.23 | SPARKS-K | | ---------------------------MKFTPSIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDSESMPSSLKHLTHILDLT--NNDLIMI---PDLSRRDDIHTLLLGRN---NIVEVDGRLLPMNV-QNLTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGN |
3 | 1ihmB1 | 0.07 | 0.05 | 0.75 | 0.65 | DisCoVER | | LVPEVNPLPVAGFTISPNNTPG-DVLFDLSLGPHLNPFLLHLSQ--MYNGWV-GNMRVRI----------------------------------MLAGNAFTAGKIIVSCIADVRTLDPIEVPLEDVTMRLVCMLYTPLRTFVVAGR---VMTCPSPDFNFLFL- |
4 | 1ei6A | 0.07 | 0.05 | 0.84 | 0.83 | DEthreader | | EEYQAQALA-LTTVL--TG--DCVVPSTNNIGAVHAPTILAEMAKAGQLV-AVVTA--I-FAHVEIAR-VG--M-PVPSVSADLSVAGMY-LSTTDYVQKHAPGT-----EAAFYAMMDSYFRYIVAITA-DHGQKVP-LIFNRKLVGLLR-FDIIDL--AL--- |
5 | 6w1cE3 | 0.05 | 0.04 | 0.72 | 0.49 | CEthreader | | -----------------------------------------------STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENIQADATDGTLKIQFASQIGLTKDHTKIRYAEGHDIAEAARSTLKVHSSSECTPGERISVSFVDSKNEHRTCRIAYHHEQRLI |
6 | 3thfA | 0.04 | 0.04 | 0.98 | 0.47 | EigenThreader | | TNLIKQKMDELIKHLNQKIVSLKREQQTISEECSANDRLGQDLFAKLAEKVRPSEASKFRTHVDAVGNITSLLLSLSERLAQTESSLETRQQERGAL---ESKRDLLYEQMEEAQRLKSDIERRGVSIAGLLAKNLSADMCADYDYFINMKAKLIADARDLAVRI |
7 | 3dl8G1 | 0.17 | 0.06 | 0.36 | 0.22 | HHpred | | -----------------------------------------------------------------KELRQKFIFTLLYRLGSH----IPIPGIN--------------FALYDSGGNLGRLTVFALV---------ENP---------GISFIAGTLVWIA---- |
8 | 2rqrA | 0.29 | 0.07 | 0.25 | 0.83 | MRFsearch | | ----------------------------------------------------------------------------------------------------------------GSSGRLLDLENIQIPAPPPIPKEPSNYDFSGPSSGIEGRGS------------ |
9 | 4bmlA | 0.11 | 0.11 | 0.97 | 0.34 | FFAS-3D | | ----DERIARVLAKASAEASPVTGEPGGFHVNIGAGNLDERSAPQEGRVAVLS-PRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYAVTGENNDYQVDASALAGLIFHRECIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMGFQAA |
10 | 6emkG | 0.11 | 0.10 | 0.90 | 1.14 | SPARKS-K | | -----SSLHYASYH--------GRYLICVYLIQLGHDKHELIKTFKGNTCVH--LALMKGHEQTLHLLLQQFPRFINHRGENGRAPIHIACMNDYYQCLSLLIGVGADLWVMDTNGDTPLHVCLESISCMKMLLVRDKGNWKPIDVAQTFE-VGNIYSKVLKEV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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