Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RLIKSKLLNLHQSSKQKTTWKYHPNKSVPSFIIRKPINMNGYDYSVFTNYPTEIDLQHGEHLPPAIKESQIKSWESAERISTNVIFGNSSESEDDIDELDEDEHTEASRSSKVNSRKNNVIQAIPGYT |
1 | 1vw452 | 0.07 | 0.04 | 0.52 | 0.67 | DisCoVER | | ---------QFEQPTELAMLCRREGLEKPVSKLVAESGRKSPVFIVHVFSG---------EET--L---GE-GY-----GS--SLAK------------A-----------------RAATDALKWY- |
2 | 3mcxA | 0.04 | 0.03 | 0.78 | 0.83 | DEthreader | | LDAQIALNGIYRLASSYYWYGDC-A--------ITNNQKIEKSLRGLSFNLTRLFGPSLGVPICYEQVSDSNALGLYINYAFE--LYINNICIIREVYLNIERRLVGEGE-----L------------ |
3 | 6i96A | 0.05 | 0.05 | 1.00 | 0.57 | CEthreader | | VALTSKKPLYEDYRQITGSIGNMGQKEMGFDFSGPLDEEKRIAYRLIGLGKGSDTQFDHVKEERYAIAPTLAIDFSDDTTLTLQGYLQHDPNGGYHGGVPADGTLSHHNGRHISREFFDGEPSKDDFD |
4 | 1h2iV | 0.05 | 0.05 | 0.90 | 0.62 | EigenThreader | | GHRVINLANEMFGNVDFVNGK----FYVGVCAFVRVQDGSYHEDVGYGVSEG-LKSKALSLEKARKEAVTDGLKRALRSFGNALGNCILDKDYLRSLNKLPRQLP-----LEVDLTKAKRQ---DLEP |
5 | 6rawA1 | 0.22 | 0.12 | 0.54 | 0.40 | HHpred | | ------CVDIVELL---Q-----PSDDVTFFICHRPLDVCNYSDQVCILGD------ASL-------EENIPAFET--------IFYDSEGEDSGAGESDQEDQ------------------------ |
6 | 2pffB | 0.09 | 0.03 | 0.34 | 0.55 | MRFsearch | | ------------------------------------------GVRVIVAGTGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHF------------------------------------------- |
7 | 5yfpE7 | 0.04 | 0.03 | 0.76 | 0.33 | FFAS-3D | | ---KQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLFNSAYRENNFTKLNE---------------------------- |
8 | 5yfpE7 | 0.04 | 0.04 | 0.91 | 0.95 | SPARKS-K | | -KKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLFNSAYRENNFTNNFNGGVNVIQSFINQHDYFI----------- |
9 | 4hc8A | 0.12 | 0.07 | 0.56 | 0.51 | CNFpred | | QALNAAIDNADRDDV-------------GALVITG-------NGRVFSGGFDLKIL------TSGEVQPAIDMLRGGFELAYRLLSY------------------------------KPVVMACTGHA |
10 | 6sd8X | 0.06 | 0.05 | 0.85 | 0.83 | DEthreader | | PQLSNTFRDLHLELGIVTADRRFG-SRQMLLYSPSS-------AIFSLADGARALQLTFILITRIYNSICAVGHIRRALDLAQDYSGKLKDHKLDLEDFCAFSFFVANLLGQEEVGE----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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