Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DVLAGLLDGPRARGAFLLRSILNPPWSLRIQDRAPLTLVAMMRGQAWVIPDHGETVRLRPGDVAIMRGPDPYTVADDPATPPQVVIHPGQHCTTPEGESLAQEMDLGVRTWGNGPDGSTVMITGTYQMHGEISRRLLAALPALLVLPEDAWDCPLIPLLGAEIVKDEPGQEAVLDRLLDLLLIAVLRAWF |
1 | 6nwhA | 0.12 | 0.09 | 0.75 | 1.00 | DEthreader | | ---------FEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYNLKQGDIFILLKGMQVEYVASIDDPWE-------------------------------------YYWIGFSGSN-ANEYLNRTTNSCVANCEESKIPQIILNMCEISKTYNPSDDILLLKELYSLLYALIEEFK |
2 | 6nwhA | 0.11 | 0.08 | 0.75 | 1.00 | DEthreader | | ---------FEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYNLKQGDIFILLKGMQVEYVASIDDPWEYYWI-------------------------------------GFSGSNNEYLNRTSITNSCVACEENSKIPQIILNMCEISKTYNPSDDILLLKELYSLLYALIEEFP |
3 | 2aacA | 0.15 | 0.12 | 0.78 | 0.88 | HHpred | | ------LPGYSFNAHLLTPINGYLDFFIDRPLGKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV--YFR---PRAY----------W-------HEWLN-WPS--------I---FANTGFFRPDQHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
4 | 2aacA | 0.14 | 0.11 | 0.76 | 0.91 | DisCoVER | | ------PGYSFNAHLVAGLTPIEADFFIDRLGMKGYILNLTIRGQGVVKNQ-GREFVCRPGDILLFPPGEIHHYGRHPEARE------------------------------------WYHQWVYFRPRAYWHEWLN--WNTGFFRPHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAI- |
5 | 6nwhA | 0.11 | 0.08 | 0.74 | 0.57 | MRFsearch | | ----------EMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKFN-GKVYNLKQGDIFILLKGMQVEYVASI---------------------------------------DDPWEYYWIGFSGSNANEYLNRTSCVANCEENSKIPQIILNMCEISKTYNRSDDILLLKELYSLLYALIEEFP |
6 | 2aacA | 0.14 | 0.12 | 0.83 | 1.51 | SPARKS-K | | -NDPLLPGYSFNAHLVAGLTPIEADFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR-----PRAYWHEWLNWPSIFAN---------TGFFRPDEA----------------HQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
7 | 6nwhA | 0.11 | 0.08 | 0.78 | 0.63 | MAPalign | | -WKKYVKENFEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKFN-GKVYNLKQGDIFILLKGMQVEYVASIDDPW-------------------------------------EYYWIGFSGSN--ANEYLNRTSITCVANCNSKIPQIILNMCEISKNPSRSDDILLLKELYSLLYALIEEF- |
8 | 2aacA | 0.15 | 0.12 | 0.81 | 0.57 | CEthreader | | NDPLLPGYSFNAHLVAGLTPIEADFFIDRPLGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEA------------------------------------REWYHQWVYFRPRAYWHEWLNWPSANTGFFRPDEAHQDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
9 | 2aacA | 0.15 | 0.12 | 0.79 | 1.05 | MUSTER | | DPL---LPGYSFNALVAGLTPIEADFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEA------------------------------------REWYHQWVYFRPRAYWHEWLPSIFANTGFFRPDPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
10 | 6nwhA | 0.08 | 0.07 | 0.81 | 1.20 | HHsearch | | MQILWKKENFEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKFNG-KVYNLKQGDIFILLKGMQVEYVASIDDPWEYYW----------------------IGFSG------SNANEY--LNRT---SIT-NSCVANCEE-NSKIPQIILNMCEISKTYPSRDDILLLKELYSLLYALIEEFP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|