>PF12803 (324 residues) QFAYEIYTLGVEGRHLIYDHVFNRLRITSSAVFKVLTNAVSHPRIFKRFWDFGVVKPNRG ANLKAQDFKLHALDICMHAVEYFMNQWDCGTPLEVYLCESDLDVVDERRETFTARHLAFL CSFYGLSSRGPKLQGLDSLQRYSAIRDYLEVQVTKDHTSRFWQLTGLIIRAVPSTVSYLM QSAVKQFRLRGLGVPTVLETWNPTFNDLLCDTVEAEKDKNMKGTSEYPRDYWGIEIPRSN IFPCHGLVPSLTRDEEKYDTSIELPLGPSYLSHQLRIVGVNSTSCLKALELTSHLSQVAN LTGNRLFVGEGAGAMLALYDSVLG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QFAYEIYTLGVEGRHLIYDHVFNRLRITSSAVFKVLTNAVSHPRIFKRFWDFGVVKPNRGANLKAQDFKLHALDICMHAVEYFMNQWDCGTPLEVYLCESDLDVVDERRETFTARHLAFLCSFYGLSSRGPKLQGLDSLQRYSAIRDYLEVQVTKDHTSRFWQLTGLIIRAVPSTVSYLMQSAVKQFRLRGLGVPTVLETWNPTFNDLLCDTVEAEKDKNMKGTSEYPRDYWGIEIPRSNIFPCHGLVPSLTRDEEKYDTSIELPLGPSYLSHQLRIVGVNSTSCLKALELTSHLSQVANLTGNRLFVGEGAGAMLALYDSVLG | |||||||||||||||||||
1 | 6v85A2 | 0.23 | 0.19 | 0.85 | 9.37 | HHpred | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGLSS-IENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTC--------TND----------Y------------IIWIIESNANLEKYPPN----SPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
2 | 6v85A2 | 0.11 | 0.10 | 0.90 | 1.01 | DisCoVER | LLLELSYYYVV-GWSNIVDYSYMILRGAALNNL---ASTLSHPKLFRRAINLDIVAPLDYIMSVDA---------ILWGCKRVINVLS--NGGELVVT------DRSMNLIARKLTLLSLIHHNGL-ELPKIKG-FSPDEKCFALTEFLRKVVN-SGLSSIENLNFMYAAFADYI--IW-IIE-SNEKYPIPNFHNFKLNAPPQGDHLYIAEGSGGRKIYYNS-RCSLVHVDLEIINAIITATPHGVLILKY----SWLPFTRFSTLTFCYFERITVLRSTYSDPANHEVYLITVSTLQGFTLISPERIYGHLKQERIVAEAI- | |||||||||||||
3 | 6v85A2 | 0.22 | 0.19 | 0.85 | 1.32 | MRFsearch | -LSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELVVT--------DRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGL-SSIENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCT------------------------------NDYIIWIIESNANLEKYPI---PNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
4 | 6v85A2 | 0.23 | 0.19 | 0.85 | 2.36 | SPARKS-K | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGLSSI-ENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCT------------------------------NDYIIWIIESNANLEK---YPIPNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
5 | 6v85A2 | 0.23 | 0.19 | 0.85 | 2.43 | FFAS-3D | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSG-LSSIENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCTNDYIIWIIESNA---------------------------------NLEKYPIPNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
6 | 6v85A | 0.23 | 0.20 | 0.85 | 6.98 | HHpred | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGLSS-IENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCT---------NDY---------------IIWIIESNA-NLEKYPI----P----NSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
7 | 6v85A | 0.22 | 0.19 | 0.85 | 1.08 | MRFsearch | --SYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAPLA-----SLDYIKMSVDAILWGCKRVINVLSNGGDLELVVT--------DRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGL-SSIENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCT------------------------------NDYIIWIIESNANLEKYPI---PNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
8 | 6v85A | 0.22 | 0.19 | 0.85 | 1.51 | SPARKS-K | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAPLASLDYI-----KMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGLSSI-ENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQVAVTCT------------------------------NDYIIWIIESNANLEKYP--IPNSPEDDSNFH-NFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
9 | 6v85A | 0.23 | 0.19 | 0.85 | 1.27 | FFAS-3D | ELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAP-----LASLDYIKMSVDAILWGCKRVINVLSNGGDLELV--------VTDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVN-SGLSSIENLSNFMYAAFASNNYYLTRKLLNSIRDTESGQ-------------------VAVTCTNDYIIWIIESNA--------------NLEKYPIPNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFP | |||||||||||||
10 | 6uebA | 0.11 | 0.09 | 0.85 | 1.26 | SPARKS-K | GSSICFLTRMTNILELVSGVISYILLRLDN--HPSLYIMLREPSLRGEIFSIPQKIPAAYP-TTMKEGNRSILCYLQHVLRYEREIITASPNDWLWIFS---DFRSAKMTYLSLITYQSHLLLQRVERNL----SKSMRDNLRQLSSLMRQVLGGHGEDTRLLKDSLRTRWVDQEV----RHAARTMTGDYSP------------------------NKKVSRKVGCSEWVCSAQ---------QVAVSTSANPAPVSELDIRSKRFQNPLISGLRVVQWATGAHYKLKPILDDL---NVFPSLCLVVGDGSGGISRAVLNMFP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |