Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | QELKQIEKWEKEQKDIFFWEKIGRWPFMLLDRLTPKIIKDKLEQLLNEMGSFIQNGAASASDTEHSEESMWDLKQAAELPLTIMDQTADEMTSGRITFATAQGATTGIGGVFTIAADIPILLGLSLKVLQEIALCYGFNPHDKQERIFIIKCMQFASSDIVGKKAVLEELALFDDPSRQAQVFSQMQGWKEVINTYRDQFGWKKLLQMVPIAGILFGSIANRSAISDVAEAGKMLYRKRRI |
1 | 4ldsA | 0.06 | 0.04 | 0.71 | 0.90 | DisCoVER | | -------LIF-ILGALGGLLYGYDNGVISGALIP--LNSTTEGIVVSSMLIGAIVGAGSSG------------PLADKL-G--RRRLV---M-LIAIVFIIGALILAASTNLLLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLG-SLNQLMITIG-------------------------------------ILAAYLVNYAFDIEGWRWMLGLAVVPSVIL-LVGIYFMESPRW- |
2 | 6h7dA | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | | ----------------------------------------I---M--LLFGYDLGISGGVTMFLKFFPQVSQMKAACKFDNQMLQLFTSSLYLAALVGVGFANQSTPVYLSALNIGFQMAITIGILA-NV--F---VKDALMSAVITGVN---F--GGI-MFICQLLVGSFIGTADWI--LAF-ICVYVAGFAWSWGPLGLVPSEICPL-EIRPAGQAINVSVNMFFTFLIGQFFLTMLCH |
3 | 6m3qF | 0.09 | 0.09 | 0.97 | 0.59 | CEthreader | | ESIAQLSRQCRALPDSEQISRRQSQVDRLYVALKQQYWLYQLSRQVDELEHWIAEKEVVAGSPELGQDFEHVSVLQEK--FSEFASETGTAGRERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVY------AGEHAEAIASREQEVLQGWKELLAACED |
4 | 4aurA2 | 0.06 | 0.04 | 0.74 | 0.83 | EigenThreader | | ----------------------------------DVVKDIVIQRVTLASRHLDELNTFVEKNDEDH-------------RFSNDIKQSRIEVKRLAGELFEELNLLGGVGFKLHLRIKQSVDRFSTAVSQRLLSSSESFLSGLTILAARDTIGKLTKLAGSIAKWA-----GPVGAAFTIG--------SDLWDEREQELKEVKASLA---KIIKEPFEDIYDVLSPQIQQVVTELAEKSQ |
5 | 6tdvM | 0.12 | 0.07 | 0.61 | 0.28 | HHpred | | -----------------LAKVWM--YASWIPRGIPKAMANELSSAAAEAIARVAQLESQGKNPY----RVA-RAEFWQMYLCWPYRFRNTVVEWETCKAKV---LKGSVDL-QDIVDLLYLLAWALGEIYGRGSLYGYRFDGEIHRQEAQNVILYKEKEAQEMAVVMEKLEKEI------------------------------------------------------------------- |
6 | 2j69A | 0.12 | 0.11 | 0.90 | 0.55 | MRFsearch | | --KKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRY------QPELNLFDFLSSGKREAFNAALQKAFEQYITDKDWKNILLNYFTVIGIGGIITAVTGILLGPIGFALL------------GLGVGFLQADQARRELVKTAKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVS-KRINDDIVSRKSELDNLVVIAQLQKIEAAYSNLLAYY-- |
7 | 2yfaA | 0.08 | 0.07 | 0.89 | 0.87 | FFAS-3D | | SHMGDIGQLNKD------LTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPE---------------NVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMA---RPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLEDARLQQFENAVLAYRDAVRQFRQGADIVKRSDALYQIQ-- |
8 | 6w2wA | 0.11 | 0.10 | 0.86 | 0.85 | SPARKS-K | | ERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDP---NVVAEIVYQLAEVAEHS-----------TDPELIKEILQEALRLAEEQLAEAARLALKAARLLEEARQLLSKNEAAKECLKAVRAALEAALLALLLLAKHPGSQ----AAQDAVQLATAALRAVEAACQLAKQYPN---SDIAKKCIKAASEAAEEASKAAEEAQRSQ------------KARDEIKEASQKAEEVKERCER |
9 | 4akkA | 0.09 | 0.09 | 0.95 | 0.79 | CNFpred | | HQLAQQGTLAGQ--ISALVHMLQCERGASNIWLC-RAGAALVDEQLTRFYAALEPARDAASRIACAVWYLPQLAALREIAAEEATGQFSRIIRHLLNIVPQLNDDPQIAGRMVALYSFMQGKELAGQERALGALGFARGQFSDELRQQLVDRID-------GQQPCFDSFQALA-QPPQTALFAEQCQASLEIEQLRRVACTRQPP-GETALRWFCAQTQRLEQLRGVEELLIVDLLNAAD |
10 | 3ofuA | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | GV-QDYFAAWKTLLVSHWILDARLSSQLQQDGAEHKAFRTPVMKGLASRFVVALEKVQAARKESRPRGS-------------C--DFVSDFAEILVQLTRLAADDYLWVDEARRMCRNLLFGGLTVAAMIGMVALHLQLPLIPAAADELMRRYPTVAVYLPSVLHNLDFAPEEVRFDR-GLAPIRHTTMGVGAHRCV--------------------------KGGNVGA--CT-LP---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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