Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRHHGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGDRPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP |
1 | 2pffB | 0.26 | 0.21 | 0.84 | 1.75 | MRFsearch | | ----VRVIVAGT----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQE-------------- |
2 | 4nl6A | 0.09 | 0.08 | 0.84 | 1.31 | SPARKS-K | | --------------------------------MAMSSGGSGGGVPEQEDSVLFRRGTGQSD-----DSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTP--KRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR----ETCVVVYTGYGNREEQSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPP---PP |
3 | 3gyxK1 | 0.04 | 0.03 | 0.72 | 0.80 | DisCoVER | | IIVEHSVDLL-MV--GG--G---M-----GNCGAAFEAVRWADKYAPEAKILL-------VDKASLER---------S--------GA---VAQGLSAINTYLGVEPVWIKDEHGNLDGAQAKAAK----------SLRN-------GDKPVR-----------------------SWQIMINGESYKVAIIERIFIVKLLLPNRIAGAVGFNLRANEVHIFK-ANAMVVACGGAVNVWYPVWNAGSTYCLLGSHSGCCGIGLWTCADGVGASGHKFSSGSHAEGRIVGK- |
4 | 1yiqA | 0.06 | 0.04 | 0.72 | 0.67 | DEthreader | | GLSYKLLRGVPF-RRAGEACCD------------ADHKRS-Y--T--ITGAPVIGNYVTA------------------WRFYTVGGTAWDS----------------VGNGSL-WDPK---RSQ-AKGD----NLFLSSIVAVWHYQTTPGDAWD------YTATQHMI-L-AELPIVLMQAPFFYVHDWQP--MSYNPGLDPVKQQAAWEVPYVTINGTVFEGSADGSGMAGAFSTFAGALS-RAGVQPYAP--RPDT--CHGIVSGVLPDLRKLT---RVPDGMPS--- |
5 | 6tzkA | 0.10 | 0.10 | 0.99 | 0.44 | CEthreader | | TMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLGYTVNAHRRPISSSLLAFGGQKD----SPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDGGSSQGFG |
6 | 5h7cA | 0.04 | 0.04 | 1.00 | 0.62 | EigenThreader | | PNLNEEQRNAFIQSLKDDAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSIVKQLAEVAKEATDVIYIVKILAELAKQSTDTDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDEIVKQLAEVAKEATDIVKILAELAKQSLAEVAKEATDKELVIYIVKILAELAKQSTDIVKQLEEVAKEATDKELVEHIEKILEELKKQS |
7 | 2n28A | 0.19 | 0.03 | 0.18 | 0.33 | HHpred | | MQPIVALVVAIIIAIVVWSIVIIEIDRERAEDSGNESEGEIS----ALVELGHHAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 5tj5A | 0.25 | 0.20 | 0.81 | 1.52 | MRFsearch | | ----------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQYREI-------------- |
9 | 4bmlA | 0.08 | 0.08 | 0.98 | 0.52 | FFAS-3D | | --VRYATALKLFSGEVFTAFNNASIFKGLVRSYDLRGGKSKQFMFTGKLSAGYHTPGTPIVGDAGIKANSQFVYSLDEIFSQYSTRAATHYDERIARVLAKASAEASPVTGEPGGNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAG---CIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMGCGSLRTSVAGSFQAA-- |
10 | 7aavA | 0.11 | 0.10 | 0.95 | 1.23 | SPARKS-K | | RDVPVLYHPVYISQWGSMWIMMRREKRDRRHFK-------RMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDS---RKYVNGSTYQRWQFT---LPMMSTLYRLANQLLTDLVDDNYFNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPNLRSGRTRRALDIPLVKNWYR--EHCPAGQPV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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