>PF12782 (291 residues) MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQ MGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGE EETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRH HGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGD RPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRHHGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGDRPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP | |||||||||||||||||||
1 | 2pffB | 0.26 | 0.21 | 0.84 | 1.75 | MRFsearch | ----VRVIVAGT----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQE-------------- | |||||||||||||
2 | 4nl6A | 0.09 | 0.08 | 0.84 | 1.31 | SPARKS-K | --------------------------------MAMSSGGSGGGVPEQEDSVLFRRGTGQSD-----DSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTP--KRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR----ETCVVVYTGYGNREEQSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPP---PP | |||||||||||||
3 | 3gyxK1 | 0.04 | 0.03 | 0.72 | 0.80 | DisCoVER | IIVEHSVDLL-MV--GG--G---M-----GNCGAAFEAVRWADKYAPEAKILL-------VDKASLER---------S--------GA---VAQGLSAINTYLGVEPVWIKDEHGNLDGAQAKAAK----------SLRN-------GDKPVR-----------------------SWQIMINGESYKVAIIERIFIVKLLLPNRIAGAVGFNLRANEVHIFK-ANAMVVACGGAVNVWYPVWNAGSTYCLLGSHSGCCGIGLWTCADGVGASGHKFSSGSHAEGRIVGK- | |||||||||||||
4 | 1yiqA | 0.06 | 0.04 | 0.72 | 0.67 | DEthreader | GLSYKLLRGVPF-RRAGEACCD------------ADHKRS-Y--T--ITGAPVIGNYVTA------------------WRFYTVGGTAWDS----------------VGNGSL-WDPK---RSQ-AKGD----NLFLSSIVAVWHYQTTPGDAWD------YTATQHMI-L-AELPIVLMQAPFFYVHDWQP--MSYNPGLDPVKQQAAWEVPYVTINGTVFEGSADGSGMAGAFSTFAGALS-RAGVQPYAP--RPDT--CHGIVSGVLPDLRKLT---RVPDGMPS--- | |||||||||||||
5 | 6tzkA | 0.10 | 0.10 | 0.99 | 0.44 | CEthreader | TMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLGYTVNAHRRPISSSLLAFGGQKD----SPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDGGSSQGFG | |||||||||||||
6 | 5h7cA | 0.04 | 0.04 | 1.00 | 0.62 | EigenThreader | PNLNEEQRNAFIQSLKDDAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSIVKQLAEVAKEATDVIYIVKILAELAKQSTDTDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDEIVKQLAEVAKEATDIVKILAELAKQSLAEVAKEATDKELVIYIVKILAELAKQSTDIVKQLEEVAKEATDKELVEHIEKILEELKKQS | |||||||||||||
7 | 2n28A | 0.19 | 0.03 | 0.18 | 0.33 | HHpred | MQPIVALVVAIIIAIVVWSIVIIEIDRERAEDSGNESEGEIS----ALVELGHHAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5tj5A | 0.25 | 0.20 | 0.81 | 1.52 | MRFsearch | ----------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQYREI-------------- | |||||||||||||
9 | 4bmlA | 0.08 | 0.08 | 0.98 | 0.52 | FFAS-3D | --VRYATALKLFSGEVFTAFNNASIFKGLVRSYDLRGGKSKQFMFTGKLSAGYHTPGTPIVGDAGIKANSQFVYSLDEIFSQYSTRAATHYDERIARVLAKASAEASPVTGEPGGNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAG---CIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMGCGSLRTSVAGSFQAA-- | |||||||||||||
10 | 7aavA | 0.11 | 0.10 | 0.95 | 1.23 | SPARKS-K | RDVPVLYHPVYISQWGSMWIMMRREKRDRRHFK-------RMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDS---RKYVNGSTYQRWQFT---LPMMSTLYRLANQLLTDLVDDNYFNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPNLRSGRTRRALDIPLVKNWYR--EHCPAGQPV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |