Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | CEGCGRVIMSDNSTCEGCGRVIMSDNSTCEGCGRVIMSDNSTCEGCG |
1 | 6tmfW | 0.31 | 0.28 | 0.89 | 1.90 | SPARKS-K | | CTSCGKEITPREFVCPNCGE---AIIWRCESCRVLSVP--YKCPKCG |
2 | 2jrpA | 0.20 | 0.19 | 0.98 | 2.65 | CNFpred | | CPVCHHALERDTAHCETCAKDFSL-QALCPDCRQPLQVVDYFCQNGH |
3 | 6tmfW | 0.33 | 0.30 | 0.89 | 1.75 | MUSTER | | CTSCGKEITPREHVCPNCGEAII---WRCESCRVLSVP--YKCPKCG |
4 | 2mxvA | 0.26 | 0.13 | 0.49 | 0.61 | DisCoVER | | CNKCGVQNFKRREKCFKCGVPKS------------------------ |
5 | 2bpsA | 0.05 | 0.04 | 0.91 | 0.83 | DEthreader | | IDVFDLRL-K-DAWQA-QSVMPPRGWIRVVNKDKVFSGECKLCG-IT |
6 | 2jneA | 0.22 | 0.21 | 0.98 | 0.64 | CEthreader | | CPQCQHVLDQGHARCRSCGEFIEMK-ALCPDCHQPLQVVDYFCQHGH |
7 | 2erjA | 0.06 | 0.06 | 1.00 | 0.68 | EigenThreader | | ECKGSLYMSSSHSSNQCQCGHCRVVGQMVQGYPAESVCHGKQPQLIC |
8 | 1rqgA3 | 0.26 | 0.26 | 0.98 | 0.58 | HHpred | | CEHDKMFLPDRFVTCPYCGAEDQ-KGDQCEVCGRPLTPEILINPRCA |
9 | 2jrpA | 0.20 | 0.19 | 0.98 | 0.82 | MRFsearch | | CPVCHHALNGDTAHCETCAKDFS-LQALCPDCRQPLQVVDYFCQNGH |
10 | 4nl4H | 0.24 | 0.21 | 0.87 | 0.35 | FFAS-3D | | CHDCGWIAE-----CPRCDSYYAQHHLRCHHCDSQRPIPRQ-CPSCG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|