Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | NRRVDLSSMIESFTSYLGRDNWTKYARILSLFILGKLSRKEMTNELDIIFNIPHSNRASLIRLHNQLLLGILTNSLKDSPLSKKGSTWGFQNDSSGINSSSSKLRRVNKHNSQIELYKKIVMSLPITDRNRLKAITREAGKKGFVYCSVLQTRLKNIPKIPIVTNPDTLKRVKTNNLKTPLEWSQDIMNGFNTPLATDNYSLPDADSLYLRMVSIAREHGLVGNVDARGIELLSMALDHYLKNIIEFTIDTV |
1 | 6t9iH | 0.80 | 0.43 | 0.54 | 7.90 | HHpred | | --------------------------------------------------------------------------------------------------------------------YKKIVMSLPLNDRNRLKMITKEAGKRGFIFCSVFQARLNNIPKIPIVTNPESLKRVKSNNLKTPLEWSQDIMNGFNVPLASESHSLPDTDSFYLRMVGIAREHGLVGTVDARCVELISLALDQYLKNIIEFTIDTV |
2 | 6tb4A | 0.45 | 0.24 | 0.52 | 1.30 | MRFsearch | | -----------------------------------------------------------------------------------------------------------------YERLKRDILALPVRERRRIKAITRESGKKGMVNSVITQTRQALIPKVPVVTRPTNVP-------GNSVQWAQDVIHGFQALLASEIYELPEMDNLRTRMTGISREHGLIGPVDDSVIEIMLIGLEQHLKGIVEAAIDIV |
3 | 6tb4A | 0.47 | 0.25 | 0.52 | 1.34 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------ERLKRDILALPVRERRRIKAITRESGKKGMVNSVITQTRQALIPKVPVVTRP-------TNVPGNSVQWAQDVIHGFQALLASEIYELPEMDNLRTRMTGISREHGLIGPVDDSVIEIMLIGLEQHLKGIVEAAIDIV |
4 | 6tb4A | 0.07 | 0.04 | 0.50 | 0.77 | DisCoVER | | PKVPVV------------------------------------------------------------------TRPTNVPGNSVQWAQDVIHGFQALLASEIYELPMDNLRTRM-TGI-SREHGLIGP-----------------------------------VD--------DSVIEIMLIGLEQHLKGIVEAAIVKYRRHTLTIEDMYDTLEQYPYLV--EPGGTLLRLQSVMLHDE-------------- |
5 | 3ig3A2 | 0.08 | 0.06 | 0.73 | 0.67 | DEthreader | | LDYYAVRVLFPGIHRDRGTVASLTMVALQSRLDYATGLLKQLLADL---------LTESVAEKMLTNWFTFLLHKFLKE--GE-PLFLLYCAIKQQMK--T--LATKGTLQKFVDDLFETVFSTFPD-RHTWKSNLRF-VNVNFV--------------SCTSEHRLSPSNKLLYA--KDIPYK--V--------------------------I--MAS-ISDQDM-DAYLVEQSRLHAN-DFNVLSA-SEL |
6 | 2f33A | 0.07 | 0.06 | 0.98 | 0.72 | CEthreader | | ------MAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNELTEMARLLPVQENFLLKFQGIKMCNKAFELYDQDGNGYIDENELDALLKDLCEKNKLDINNISTYKKNIMALSDGGKLYRTDLALILS |
7 | 6iihA | 0.08 | 0.08 | 0.95 | 0.68 | EigenThreader | | SLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ--KRWDEAAVNLAWYNQT----PNRAKRVITTFRTGDFLFSVMFEQMTSVEDTLSGIQTAGCGSTFFRDLGDKGLISYTEYLFLLTILTKPHSGFHVAFKMLD---TDGNEMIEKREFFK----LINTTLQMRFFGKLHYKEFRRFMENLQTEIQEMEFLQFSKGLSFMRKEDFAEWLLFRAVKVATGQELSNNILDTVFKIFDHEEFLGVLKNRMHR |
8 | 6tb4A | 0.46 | 0.24 | 0.52 | 2.83 | HHpred | | -----------------------------------------------------------------------------------------------------------------YERLKRDILALPVRERRRIKAITRESGKKGMVNSVITQTRQALIPKVPVVTRP-TN------VPGNSVQWAQDVIHGFQALLASEIYELPEMDNLRTRMTGISREHGLIGPVDDSVIEIMLIGLEQHLKGIVEAAIDIV |
9 | 6kthA | 0.12 | 0.07 | 0.56 | 0.30 | MRFsearch | | ----GTENLYFQ--SMVSDFRKKKLLHVFTAFFDGTIDKKDFELAIERISKSGDAQYKEVQDTLLKVWDGLSSAD---------------------------------SKEEWISLWEKFSSSPSDWQNLYCKFIFQLE--------------------------------------------------------------SIDSEEFSSVYASF--------GLDKAEAASAFQKLSKEFQELFKEYFA-- |
10 | 6t9iH | 0.80 | 0.43 | 0.54 | 1.28 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------YKKIVMSLPLNDRNRLKMITKEAGKRGFIFCSVFQARLNNIPKIPIVTNPESLKRVKSNNLKTPLEWSQDIMNGFNVPLASESHSLPDTDSFYLRMVGIAREHGLVGTVDARCVELISLALDQYLKNIIEFTIDTV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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