>PF12761 (199 residues) NKDACLAFLHILNNRHEGYRIPRTVPASLRASFERNQIDYQVGSARNAAQSRWATKADDE TSTGRKAKFGDQYLTRLGRSGFKTAGTDFSNAQTDAEWEEVRLKKQLAELDEKIAKVEAA AERRKGGKRDSKPALVKRELEQLLDYKRKQLRDLEEGKATNRPGGNLKSVHDDLQTVREQ VEGLEAHLRSRQEVLEQLR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NKDACLAFLHILNNRHEGYRIPRTVPASLRASFERNQIDYQVGSARNAAQSRWATKADDETSTGRKAKFGDQYLTRLGRSGFKTAGTDFSNAQTDAEWEEVRLKKQLAELDEKIAKVEAAAERRKGGKRDSKPALVKRELEQLLDYKRKQLRDLEEGKATNRPGGNLKSVHDDLQTVREQVEGLEAHLRSRQEVLEQLR | |||||||||||||||||||
1 | 6ezvX1 | 0.07 | 0.06 | 0.79 | 0.59 | DisCoVER | QTTQS-AFLATTVIT-AQCHAINTQFTPPTDDLGPQVSSIPVKGMNKELSMNAINNRAAIEKLNKDLVYAQVAVGVIF------VAGVALTVATGTAAAV-SG--GI-AA--VGAAGV-TWGVLQNQIDDDYDSIAQE---------------QKQKAEDQQQIIA------LQ-GL--SN--ASSAVVSAIETSTVL- | |||||||||||||
2 | 5hziA | 0.08 | 0.06 | 0.73 | 0.83 | DEthreader | NYVNDLQLVTEQK-MEVAVNELIMCNIKLLKALRRK--I-REEILGRN--VQY-IIDEAAKEL-----------------------------GDILSAQLPHM-QPYIRFCSRQLNGAALIQQTDPKEKAPLSSFIL-KPMQRVTRYPLIIKNILENTPHDHSHLALEKAEELCSQVNEGVSE--A------------- | |||||||||||||
3 | 5vo5A | 0.13 | 0.11 | 0.81 | 0.51 | CEthreader | LQQRLEKYQSVEAAAKA------ENNSGKARRFGRIVKQYEDAIKLYKAGKPVPYDELPV---------------------PPGFGGTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKEVALQALKKKKELEKQLQQIDGTLSTIE----------MQREALESANTNTAVLTTMKNAADALKRAHQNMD | |||||||||||||
4 | 6qajA | 0.04 | 0.04 | 0.98 | 0.55 | EigenThreader | INMVFQMGSLRMLQQKRWDEAAVNLAPNRAKRVITTFRTGTWDAYAAEALELLEHCGVCRERLRPEREPRLLHSACSACLGDIVENYFMRDSGSER----TVYCDCQLNAAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNRQHWTMTKIQKHQEHILRFAS | |||||||||||||
5 | 5xg2A | 0.14 | 0.10 | 0.73 | 0.52 | HHpred | ---------------------AREEERN---ALVVRLGEREEFDT-V-V---------KELEEARRIKRAEEEERLKAI---LTGE---ARLPG-LRERAENLRRLVEEKRAEISELERRLSSI--TSQSFELRIKLSDLEKELELARKDLEKVLA---------EERAVREEIEVAKRRINELDTLIERERGELAKLR | |||||||||||||
6 | 6f1tX | 0.16 | 0.11 | 0.65 | 0.30 | MRFsearch | --EHLEQEKHELRRR----------FENREGEWEGRV--------------------------------------------------------SELETDVKQLQDELERQQLHLREADREKTRAVQLDQLSRASEVERQLSMQVHALKEDFREKNSST--NQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQ | |||||||||||||
7 | 3na7A1 | 0.12 | 0.06 | 0.51 | 0.86 | FFAS-3D | ------------------------------------------------------------------------------------------------EPLIREKRKDLDKALNDKEAKNKAILNLEE--EKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKS | |||||||||||||
8 | 6fpdA | 0.09 | 0.09 | 0.93 | 0.64 | SPARKS-K | -----------IDFPFAHEDVVQKTVDDVRTLSNMAAADQGVHDVNHSSKTLAERYKDDITALAVLPPRVDEFAKSFNDILWAGRTSATHGVSRITDFVDVTVVGIVEDIPEDRDEAVIELNAIAGQKSKPVFPGATRRLDGIWNTSSTDAANIAKV---LAIEKTVKELTTAFSPAKAGYKKVQEALRAYASSITKLA | |||||||||||||
9 | 5j1iA | 0.16 | 0.11 | 0.65 | 0.56 | CNFpred | VRSLSAIYLEKLKTIS-------LVIRGTQGAEE----------------------------------VLRAHEEQLKEAQAVPAT----------LPELEATKASLKKLRAQAEAQQ------------PTFDALRDELRGAQEVGERLQQRHGERD------VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLG | |||||||||||||
10 | 1vsy5 | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | ------------------------------TV-NEDPDVDLENIRANSLHQSRVLLH-S-TN-R-KASENLLLVIIQLATSLYMKIQCCRVGAMGWKIRMFILIIHLVVKLGNSFFAGLVCGRLRSKTFCHIAPDVGKLFDLVAYIKKQFEIIKNLEDYLPFIAIVVQIQLILEFVVSLIERFAKGLD-VNKYT----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |