>PF12751 (390 residues) TVETETVSSIPQVALAPNSKMESSSGTLKAKASTETIKPKKDKKKVGRKQPAVTTAIGSS KADIFEAKVASAVDEADSSDSEETFVYDSNPPDAGDRPRRYHSRTPSATSMASQADRNAM RSIHSILENGGGPPPVIMKKGMKFVNSFAGSGGENLTAGEDDGKGSGRSAGPGSGRGTAR HHHHNLTHIGRWGRNPGNTHTSLFDNDSPFPNAARSKFSGVQSRQSSGPPSPRFLNHSRG PSGNGKRPLVSGPSYDLDDPTTGADDERTPLLSPSMRSARGRSRRTPASLRHLESQSYRQ QPSYLNRFAACLVITMMLLLVITGAIGFMFATSQPLMDIELVSIKNVVASDPELMFDLTV KAHNPNIVVVSVDQANIEVFAKSPHAGSDS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TVETETVSSIPQVALAPNSKMESSSGTLKAKASTETIKPKKDKKKVGRKQPAVTTAIGSSKADIFEAKVASAVDEADSSDSEETFVYDSNPPDAGDRPRRYHSRTPSATSMASQADRNAMRSIHSILENGGGPPPVIMKKGMKFVNSFAGSGGENLTAGEDDGKGSGRSAGPGSGRGTARHHHHNLTHIGRWGRNPGNTHTSLFDNDSPFPNAARSKFSGVQSRQSSGPPSPRFLNHSRGPSGNGKRPLVSGPSYDLDDPTTGADDERTPLLSPSMRSARGRSRRTPASLRHLESQSYRQQPSYLNRFAACLVITMMLLLVITGAIGFMFATSQPLMDIELVSIKNVVASDPELMFDLTVKAHNPNIVVVSVDQANIEVFAKSPHAGSDS | |||||||||||||||||||
1 | 4qc8A | 0.06 | 0.05 | 0.78 | 0.70 | DisCoVER | NIVVTKNTRQFICDIKHLYKYAITTPWSYFNFHRFRPKA----------------------MI-VRV-YNLQIAGMHIFCDGYVQHPWDQCMPELPNSIWELPQYAYIPAPISVVNTTNTVEEHLLLDHEVLRTGESTEFTFNFWIENNITFSMPQMYNPLVRSRRIYSYSGPNAFQNAALRTSN-WMSGPGIARG---THNATLQTQSAGALVTMVTGVGAVRVGYSTDYGGQQPDSDLLRLNARHTFT-REARTYKEW--WMLNQMWDSAPISR---------------------------------------------------YN-PIWVKVPDTQDGSIPMSHPPGTIFIKLARIPVPGDSFLNIYVTGQVSCEVVWEVEKRTR- | |||||||||||||
2 | 1dl2A | 0.08 | 0.05 | 0.58 | 0.67 | DEthreader | ---QPLGIVVDLMLMYNSSTLYKSEFEAEIRSHWINLDFDIDA----------N--FETTRMLGGLLSAYHLSDVLEVGNKTVYLNK----------------AI-----------------------------------DLGLALAFLSTQTGASTLYNDTYGLVPIYTF--FGASTIRFGDYELKDHLVCFMGAGIDCYMYKSSLAPEI--VVFND-GNIKDGW------------------------------------------------HNLQRPVIGAEIATSFENCVDCLDTLPTKKSNNMEFWLETLKYLYILFLDEFDL---------TKVVFNT-----------EAHPFPVLD-------------------------- | |||||||||||||
3 | 6qp7A | 0.07 | 0.07 | 1.00 | 0.74 | CEthreader | TWNFYYERPCCTVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNAHNPKDYVIYANLTYLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGTNAEFTKADTVIFRTGSFDIGEYVYFFFRETAVEYINCGKAVYSRIISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHEHNNPVYYKRDLVFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVMEISQ | |||||||||||||
4 | 1xi5A | 0.04 | 0.03 | 0.88 | 0.72 | EigenThreader | ECFAVRGQAGGKLHGTPPTGNQPFPKKAVDVFFPPEAQNDFYDLETGTEATAGKGQVEENIIPYI-----------------TNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKK-------VGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALKHFKYIQAACIKEVERICRESNCYDP-------ELTDQLPLIIV-----------------CDRFDFVHDLVLYLYRN | |||||||||||||
5 | 1yycA | 0.13 | 0.03 | 0.23 | 0.52 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHLEASAVVEEK----ASVISSLLDKAKGFFA----EKLANIPTPEATVDDVDFKGV--TRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGT | |||||||||||||
6 | 1yycA | 0.14 | 0.03 | 0.22 | 0.52 | MRFsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHHLE--------------------------------------------------------------------------------------------------------------------ASADEKVVEEKASVISSLLDKAKGFFAEKLANTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKS--------- | |||||||||||||
7 | 2akhY | 0.08 | 0.07 | 0.84 | 0.52 | FFAS-3D | ------MAKQPGLDFQSAKGRIGSFISI----FALGIMPYQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLA-IFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDK----------VMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMD---------------------------------------- | |||||||||||||
8 | 4btgA3 | 0.12 | 0.11 | 0.86 | 1.29 | SPARKS-K | KDLNGSARGLTQAFLSVGALQLPLQFTRTFSASMTSELLWEAYYRVGRTATYPF--DANAVVSSVLTILGRLWS-------------PSTPKELDPSARLR-----NTNGIDQLRSNLALFIAYQDMVKQRGRAEVI----------FSDEELSSTIIPW---FIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQ-FAKEITAFTPVKLANNSNQ----RFLDVEPGRMSATLAPIGNTRG---TVNSNGA--EMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESARASNDLKRSMFNYYAAVMHYAVA-------HNPEVVVS--EHQGVAAEQGSLYLVWNVRTVGYNAISIRTPE-PLEAIAYNKPIQPSE | |||||||||||||
9 | 2rdyA | 0.19 | 0.04 | 0.21 | 0.59 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDGNFSATAGIAEMLLQSHQGYLEFLPALPDSWKDGYVKGLRGRG----GYEVDLAWTNGALVKVEIVSTTQTCEVLTRISMRITES | |||||||||||||
10 | 2e1rA | 0.08 | 0.05 | 0.61 | 0.67 | DEthreader | -VDHGKLTSLSMDVKEIKQKTDGNSFLINLGALVVVDTIEG---------------------------DRALLELQVSDLYTARTVEVNVVSTADELGDVQVY--PARGTVA--------------------VDKAKMMDRLWGDSF---------------W--TNKDTDA------G-KPLERAFNMFILD--------PIFRLFT-------AIMNFKKDEIPVLLEKLEIV-----------------K--------------FLPADA--E-----------PSPVTAQAYRAQLYVSKAPLKTGVMKFSVS--PVVQVAVLTYMSESGE---------ESSQTALSYLKAEPCFGPDG-GKEEMRSVRVFLLWQYDKL------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |