Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | AKQLAILIYAILKEQKKTRGKARMNTMLRSGKELRVFAVKPEDLKTFCQEAKRYGVLYCVLKSKNSKDSVVDVMVRAEDASKINRIFEKFEMATVDMGTIEQDLERGLEKAGEGEIQTHQQEERGQSTNPTKGREAKSSPSEPTYEARRAAGGTSKPNAKPSVKQELRNIREQQGKNAAR |
1 | 1xtyA | 0.06 | 0.03 | 0.44 | 0.62 | DisCoVER | | ----------------MIKMV--I--VV----RSDIKMGKGKIAAQVAHAAVTLWPKIIVK------------VNSLDEILP--FS--II-------------------------ED--AGKTQLEPGTITCLG----IGPAPEV----------------ITGDLK------------- |
2 | 4gzkA | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | | ------IWKRVWGHM------ALQPFATGC------YDHS--FSEEKIDLSLEVGKIMASLAAYTVGQVKARHFTS--LFAKVWKVIDTVSDVVNMDAILGDMPFGWFKSEYRFL-LL-TQPQEQR---------------VFSGSTPQRPRFWLGEWKMVKMYHRFTDEEID--LQPIF |
3 | 6o7ua1 | 0.08 | 0.08 | 1.00 | 0.70 | CEthreader | | LDESLDSLRSKLNDLLEQRQVIFECSKFIEVNYMITGSIRRTKVDILNRILWRLLRGNLIFQNFPIEVEKDCFIIFTHLLKKVKRVIDSLNGKIVSLNTLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTKREKYVYTTLNKFQQESQGLIAEGWVPSTELIHLQDSLKDYIET |
4 | 5k8bA | 0.04 | 0.04 | 0.98 | 0.70 | EigenThreader | | GPEEKQEVADVMEHNDRWKTRDMEQLLCEKMNVKHAHLLSS--GTAALQTAMMAADVGCYSFDSITCGEGGAVITN--NTEIYDNAHMFSDFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMASIPEIPDPEGDSAGNWHYLKNWKHIQELKAPAALPITLIDAIMSAQIAERIE |
5 | 1q7sA | 0.15 | 0.07 | 0.49 | 0.47 | HHpred | | -SHAAVSAYKQIQR----RNPEMLKQWEYCGQPKVVVKAPEETLIALLAHAKMLGLTVSLIQDAGRAPGSQTVLGIPGPADLIDKVTGHLKLY--------------------------------------------------------------------------------------- |
6 | 6o7ua | 0.11 | 0.08 | 0.72 | 0.55 | MRFsearch | | --EVERMVGFLNEVVEKHLSLENVNDMVKEINYMITGSIRRTKVDILNRILWRLGNLIFQNFPIEVEKDCFIIFTHGELLKKVKRVIDSLNGKIVSLNTRSSELVDTLNRQID------------------------------------------------DLQRILDTTEQTLHTELLV |
7 | 1xtyA | 0.10 | 0.05 | 0.51 | 0.64 | FFAS-3D | | VAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNLDEIISRAKKAETMNLPFSIIEDTQLEPGTITCLGIGPPENLVDSITGDLKL---------------------------------------------------------------------------------------- |
8 | 6wvsA | 0.11 | 0.09 | 0.82 | 0.59 | SPARKS-K | | VDEMLKQVEILRRLGAKQDDWRILQEALKKGGDILIVNADVDEMLKQVEILRRLGAKQIAVVSDDKKGGDI-LIVNATDVDEMLKQVEILRRLGAKQWRILQEALKKGGDNATDVDEMLKQVEILRRLGAKQ--------IAVVSDD----------------WRILQEALKK------- |
9 | 1xtyA | 0.10 | 0.05 | 0.52 | 0.68 | CNFpred | | VAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNLDEIISRAKKAETMNLPFSIIEDAGEPGTITCLGIGPAPENLVDSITGDLKLL--------------------------------------------------------------------------------------- |
10 | 5hb2C | 0.06 | 0.04 | 0.71 | 0.67 | DEthreader | | KATTFLEKQFWNEVNSLIALPDVV-KI------------VELQ-QINGEYV-----AIVFY-----------FVTEAQYVNSNQAHFRAIDRTFSYLQCGRLARELQLQILAFAIAVLYTDFRAAESRERTDAVIASEAISNNLLWTLCRQRERLAGG---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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