Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | IFVVEDHHEVLTFLYRCLGSKHLPLQGNRIVHFDSHPDMCIPKHMPANYVFNKDDLLDSISIENWLMPTVFAGHVERIVWIKPPWSEQIPKGKYAFHVGEFEGSIRTDSTLEYFVSEGCYQPEDKLENRKRLQLEVCSVEEYPVAEDTDLAQGYILDIDLDYF |
1 | 5ynlA | 0.16 | 0.10 | 0.66 | 0.80 | DisCoVER | | LTVTGDHSLAMGTVSGTF----KAYPEACLIWVDAHADINTP-------------HTTGRLHGCPVSFLLGKPCLERIVYIGL-RD---------------------------IDAGEILK---------DNNIKCFSMFHVKVVEALHVNRPIHLSFDDAM- |
2 | 2y2wA | 0.08 | 0.06 | 0.79 | 0.83 | DEthreader | | SFVEHLGRCVYGGIRDVLDLKELGV-TCVRYPGVYNEDGIPRENR-------------NEMGIDDFYRWSQKAGTEIMLAVNMGRGLKAAL--LEY-V--------NGAGTAWAD--QRVAN--GIEEPMDIKMWCIGNMDSSGCHALSFSASRAQL------ |
3 | 3lhlA | 0.13 | 0.09 | 0.69 | 1.11 | CEthreader | | PFIGGEHLVTLPAFKAVHE----KYNDIYVIHFDAHTDLREEYNN------------SKNSHATVIKRIWDIVGDNKIFQFGIRSGTKEEFKFATEE----------------------------------KHTYEIGGIDTFENIVNLNGKNIYLTIDLDVL |
4 | 4bqeA1 | 0.07 | 0.06 | 0.82 | 0.68 | EigenThreader | | NPEADDATEIAGNIVYHAKYSPHFSPPKQTYYLSM--EYLQGRANLQGPYADALRTLLGRLASCFLDSMATLNLPAWGYGLR------YRHGLFYDVPIPGYG----------------------TKNTISLRLWEAKARAEDLDKWSEFPSKVAVQMNDTHP |
5 | 5zeeA | 0.15 | 0.13 | 0.85 | 0.39 | HHpred | | INIGGDHSIGLGTIAGVVKAMK-PNARVGVVWFDAHPDMNTPENSPSGNIHDVQFEIQDKHIDHFTAEDVKRVGMKEVI----EAINKKFVDYDVIHLSFDDPELGTGTPV----PKGISLEMSEMKMKKLHSVDIVEYNPKIEEEI---------------- |
6 | 3nipA | 0.18 | 0.13 | 0.70 | 0.60 | MRFsearch | | --VGGDHLVTLPIFRALGRE-----RPLGMVHFDAHSDTNDRYFGDNPYT-----------HGTPFRRAIEEGLLDPL---------------RTVQIGIRG----------------SVYSPDDDAFARECGIRVIHMEEFVEARRVVGAGPTYVSFDVDVL |
7 | 4rhiA | 0.15 | 0.10 | 0.66 | 0.50 | FFAS-3D | | VSVGGDGSATLSVEAYKRLFPS---DDIVIVHFSARPSVSDP--------------------RSPLRVLLDKGLLKGVVSV---------------------------------GNRQVSSEDRKVRKLHKFYDHAIYSKGLFCIRDIRNDYPVFISIDASVL |
8 | 5ynlA | 0.13 | 0.10 | 0.77 | 0.65 | SPARKS-K | | VTLGGDHSLAMGTVSGTFKAY----PEACLIWVDAHADINTPHTTESGRL-----------HGCPVSFLLGLDGIPEF-----SWIKPCLKPERIVYIGLRDI----------------DAGERKILKDNNIK--CFSMFHVDKYGNPDRTRPIHLSFDVDAL |
9 | 1p8qA | 0.11 | 0.09 | 0.79 | 0.81 | CNFpred | | VVLGGDHSMAIGSISGHARVH----PDLCVIWVDAHTDINTPLTTSSGNL-----------HGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRD---------------VDPGEHYIIK---TLGIKYFSMTEVDKLGIGK-KRPIHLSFDVEGL |
10 | 5ygrA2 | 0.06 | 0.04 | 0.71 | 0.83 | DEthreader | | IHIKDEFTLAVEAYEQLAETNSPLP--THLIL-QAGV-GS--------------------FAGSVMGYFVEKMNIPNIIVVEPHQANCLYQSAV--------------DGQPPNIISWPI----------DNTSCFISADLLLYLANLQLSAHVLLISTEGDT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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