>PF12635 (182 residues) HQTLGFGVPATSNPHHFIVEIPRTNTGSVGIVENLGMQTHDQSQSLIVRVLLERPRWTAI RGEVQRAFNARLKERNLKTSTWKVGANPVDRLLGKELCVLAWAVEGMEFDHIPIAVRNWL ALRPEERWWLFGMTALSTGGINDGNKGWRLALRHALGDVAQHELFQHRPPQSKVKSTEKD TL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | HQTLGFGVPATSNPHHFIVEIPRTNTGSVGIVENLGMQTHDQSQSLIVRVLLERPRWTAIRGEVQRAFNARLKERNLKTSTWKVGANPVDRLLGKELCVLAWAVEGMEFDHIPIAVRNWLALRPEERWWLFGMTALSTGGINDGNKGWRLALRHALGDVAQHELFQHRPPQSKVKSTEKDTL | |||||||||||||||||||
1 | 3hv1A | 0.07 | 0.05 | 0.73 | 0.65 | DisCoVER | ----ATQQWQTYTEKKIKIGFDATFVPGYIANVFYGI----------DVEWQ-A--I--------------------------DWKELKNGTIDL-IW--NGYSEPYVNEQ-VLV-TKKSSGIDSVAGAGK-TLGAQASGYAFLKVANQKVVQYLNIDGLLIDRVYAVPAGYEGESFFVAT- | |||||||||||||
2 | 2b2jA | 0.06 | 0.04 | 0.75 | 0.83 | DEthreader | -WLAST--A-------LVMLM------VPGV-----------------FFYAMIALSFISLIITVLLWIFYYYALSVK---------FMMYQMMFAAVTIAILTSAIAAKSFILSALWLTFVYAPFAHLDGGMIAP--IGAGCDAIHGIGTTAYAFLVTLIKADAAVGLRV-SQHEEVAY-T | |||||||||||||
3 | 3eojA | 0.07 | 0.07 | 1.00 | 0.52 | CEthreader | NVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVDIANETKDRRIAVFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVDTWEGFQQSISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGKGPVGVTRWKFSHAGSGVV | |||||||||||||
4 | 5wlnG4 | 0.12 | 0.07 | 0.53 | 0.67 | EigenThreader | QNPFQTGTTVEKDIGVSLVTPINDGAALRLIQEISALLNTDLITSKRIKILAENG-----------------------------------------------------------------------------QKVPLLGDIPLLGRLF--RSSAGLAALSGKKYSPTNANQLFDG------- | |||||||||||||
5 | 1w26A | 0.09 | 0.04 | 0.47 | 0.33 | HHpred | --------------------------------------ETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKV--PN-IVAQRYGAS--VRQDVLGDL-SRNFIDAIIK-EKINP-------------AGAPTYV-------------------------------------- | |||||||||||||
6 | 1t11A | 0.11 | 0.05 | 0.44 | 0.48 | MRFsearch | ----------------------------QVTVETLEG------LQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKV--PMKMVAKMYGKAVR----------QDVLGEVM--------------------------------QRHFIEAIVK------------------------ | |||||||||||||
7 | 2dc3A | 0.09 | 0.06 | 0.70 | 0.45 | FFAS-3D | -----------------------------------------------------QAMWARLYEDVGVAILVRFFVKHMEDPLEMERSPQLRKHACRVMGALNTVVENLDPDKVSSVLALVGKAVEPVYFKILSGVILEVVFPPETQRAWAKLRGLIVTAAYKEVGWVQQVPNATTPPATLPS- | |||||||||||||
8 | 5cwjA | 0.11 | 0.08 | 0.77 | 0.65 | SPARKS-K | ----------------------------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKRVILRIAKESGS------------EEALRQAIRAVAEIAKEADSEVLEEAIRVILRIGSEEALRQAIRAVAEIAEAQDPRVEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ-- | |||||||||||||
9 | 4zleA | 0.11 | 0.07 | 0.67 | 0.58 | CNFpred | ---------------QYRRELAA--QEQQTFRFIFGPAFDESEAIALRNKYLSAEGFAKAKSEYQTYITSGK-----GCLQINTPDPELNNFVNHWLPRQVFYHGDV--NRLTTDPQTRN-----YIQDNMGMSYIK-------PNITRQAFLHALSQ------------------------ | |||||||||||||
10 | 3mkqA | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | PGPYLFSGALDWNGELVMIVNTNSGDEASGYTLLFNKYLAIGVDAFDVLYELS---ES--IT-------------------S------GK-WVGDVFIYFVGGKT------YN--LA-VYEISLEVLEFQTLTLEIE--------LEGQEYY-A--SPDQDQKFEAMKALGAIETLHEGVTK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |