Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | RMYEDQCKADREGGDSDASSSEPTTGREAAQSPMGPASSPLRFRRASRADEKPCADSDQELDQQEERSAGVGSPGPEP |
1 | 2pffB | 0.15 | 0.06 | 0.42 | 1.17 | MRFsearch | | ---DDDYGFKQGGGGGGGGG--------------------------------LYKTSKAAQDVWNRAD---------- |
2 | 3hgfC | 0.13 | 0.13 | 1.00 | 1.29 | SPARKS-K | | KKIENVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNEKIKKKSEKSMEKYIKDLDEIKEQSPKAEM |
3 | 6i2oA | 0.05 | 0.03 | 0.56 | 0.58 | DisCoVER | | IEHLVTLALASKNAKNEDGIVN---------------SLAKDTSAPGS------------------AHQILISTLTY- |
4 | 2qj0A | 0.07 | 0.06 | 0.87 | 0.83 | DEthreader | | ELN--DCFRNQSLTFQDRLVGYVAFCGAFINITVSNVNSYTDLSIQRA-LEGTA-LD--LLNAVFTL-LCNKH---VS |
5 | 2bwoB | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | | EVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAPPAIAAGAQASIAFLKTAEGQKLRDA |
6 | 1aa0A | 0.09 | 0.09 | 1.00 | 0.57 | EigenThreader | | NAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQAL |
7 | 6h82b | 0.19 | 0.08 | 0.41 | 0.26 | HHpred | | -----------------------KTVGGRTNSPLGVLNTPFSFVEKLG---GAIPCET-------------------- |
8 | 5l4kZ | 0.16 | 0.12 | 0.72 | 1.00 | MRFsearch | | ---------------GGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDKDKEQELSEEDKQLQDELEMLVER------- |
9 | 6cfwI | 0.05 | 0.05 | 0.94 | 0.31 | FFAS-3D | | -LLNLWAKKSGMGTREVGEGTKIFISGEDPEKVIPGFEHLEGYYTGRNTMWGLVNGVKKFFATLKNDHTGLLPD---- |
10 | 5jcss | 0.06 | 0.06 | 1.00 | 1.19 | SPARKS-K | | RGVEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKPSYLSRPCIFAQVHDILLLSDEEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|