Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MVDTQTFAWPVGFGLSALDLDELDDSSHSMDMKPFSTLDYSTISGIEYEPSPAQSEAPHMMDLTHMYSYRAQENYSSYRAQQAQNSIKL |
1 | 2pffB | 0.15 | 0.03 | 0.22 | 1.08 | MRFsearch | | -------DDDYGF------------------------------------------------------LYKTSKAAQDVWNR-------- |
2 | 3hgfC | 0.06 | 0.06 | 0.97 | 1.03 | SPARKS-K | | KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMKSMEKYIKDLDEIKEQSPKAEMN--- |
3 | 2lw5A | 0.06 | 0.03 | 0.61 | 0.65 | DisCoVER | | MK-FIKYLSTAHLNYMNIAV--YEN----GIKARVENV-V-------------GKSVGARFGLGRIE-------------NAMNISRR- |
4 | 1vt4I | 0.03 | 0.03 | 1.00 | 0.48 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2gezC | 0.07 | 0.07 | 1.00 | 0.62 | EigenThreader | | SIALHGKPREEGLRHCLQIGVEALKPPLDVVELVVRELENIEHFNAGIGSVLTNSGTVSTVLNPISLARLVMDKTQDFAKQQGVETVDS |
6 | 6hq6A | 0.26 | 0.12 | 0.47 | 0.37 | HHpred | | WLNTQRPEWLVGNGVSMVTLYYLRRFLKFFD-QLLENIKISNE---------------------------------------------- |
7 | 4bs9A | 0.22 | 0.09 | 0.40 | 0.77 | MRFsearch | | --DSVCLWWYNRVSRPAVDLSSFDEPY-------------------------------------------FLQLQQFYQTQ-------- |
8 | 6em3J | 0.06 | 0.04 | 0.72 | 0.25 | FFAS-3D | | ------------------NTKAMKHALERVQLPW-KKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDE------ |
9 | 2wzpR2 | 0.11 | 0.09 | 0.84 | 0.91 | SPARKS-K | | ----------YNFAVVFVKNKATDDYTDP--PKMYIAKN--NGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISP |
10 | 6wumb | 0.33 | 0.08 | 0.24 | 0.72 | CNFpred | | ---VQLHVWGPAFGLPSIDAECLA----------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|