Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PPSDSDWTSRVDPTKLKNRKFASGKGAKAPAERGVGGISAIWTETPEQKRQRLADEVLGRKDAAASSREAAGPAAARRPEESQEDIETARRIREYNEKNRGRSLYEEHQQQQQQTPREKEDDPSKRAFDREKDMALGGRLGHGQRKELLAKAADFGSRFQ |
1 | 1ciiA1 | 0.08 | 0.07 | 0.85 | 0.65 | DisCoVER | | NPPR--VDVFPPA--W---SSFGNKTIWSPTRSDIEKRDKEIRTAG-------KRLSAAIAAREKD--ENTLKTLRAGNADAADITRQEFRLLQAELREYGFRTEIAG--YD-----ALRLHTESRMLFADADSLRIARLIEQAEKRQQNADKKAADML- |
2 | 2jlnA | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | | -IPITLKALLSL---F--QTWLGALALDEITRL---WF-------------IRWMNVFASPVLLAM-GVYMVYLMLGADVSLGEVMSMGGPM-FSTAIMIFVGG-WIAVVVSIHDISYTLGSAVVGL-M-MP--W--QFAG-VLNTFLNLLASALGPLAM |
3 | 1u60A1 | 0.07 | 0.07 | 0.95 | 0.49 | CEthreader | | SLNGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFLNTIELATLGATLAAGGVNPLTHKRVLQ-------ADNVPYILAEMMMEGLYGRSGDWAYRVGL-PGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVF |
4 | 1z1nX | 0.05 | 0.05 | 1.00 | 0.50 | EigenThreader | | RHVVAEAKRLQVKEDESSCVYCHKQEPLPSPVDRVVPSTRDASHESCVNCHLSTRKAQTESGPVLCVGCHTAEAQAAWKKEEREATAAKILAAKHRKIYQKLVEEAAMANHFHGDALTHNAKPSLNPPKCASCHSKANQPGLKGAFHNQCIGCHQEMQVN |
5 | 2pffB | 0.17 | 0.13 | 0.75 | 0.34 | HHpred | | ---------ELIRTTLDEKVFTQGL------------NILEWLENPSNISCPLIAKLLGFTPGTGHSQLVTAVAIAESFFVSVRKAIFFIGVRCYENTSLPPSILEDSLENNE------GVPSPM--------LSIS-NLTQEQVQDYVNKTNSHL---- |
6 | 5gmkc | 0.14 | 0.12 | 0.85 | 0.50 | MRFsearch | | --SELRWNEYLNPKL----------------------NFTEFSKEEDAQLLDLAADMMARPADSEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYIDYNEDIVYGIYDTSTEDRQIKKKFEQFERKVN |
7 | 5d2sA | 0.22 | 0.12 | 0.57 | 0.64 | FFAS-3D | | -------------------------------------------ETSEERAARLAKM-----SAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQ-------RQA------RLLRMSAYAAKRQA-------- |
8 | 6ybtu | 0.13 | 0.09 | 0.72 | 0.78 | SPARKS-K | | --------------------------------------------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKELDPDFIMAKQVEQLEKEKKELQERLKNQEKKID |
9 | 3r6hA | 0.21 | 0.04 | 0.21 | 0.49 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------TFFGETALAAGFIDEISLPEVVLSRAEEAAREFA |
10 | 3qa8A | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | | -------PK--ERWCLEIQMKKLN--HPNTSDLQPGIHKIIDLGYLCTEFVGTLQYLL-TLEGFLPTPLRRVWIWTILKEDCARLLQGQRTSMVNLLRYNTELS-KKKNSMTSECEKLDFRSSIQDKYQLWNLLKIACSKV------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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