>PF12543 (194 residues) NLISTAYGLDPNNVQGGPSWLEMDRFDIVAKAPAKSNQADLKLMLKSLLANRFALIAHNG TAPMPAYALGVIPGGKPKMTESDGTAQTGCVPHPPPQNEAPGVVSNIVVTCHNMTMETFA EMVHMMAGGYLANPVVDATGLKGSWDFDLTWTGKGQLQKAGADGISIFDALQKQLGLNLE LKTAPRAVLIVDSV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NLISTAYGLDPNNVQGGPSWLEMDRFDIVAKAPAKSNQADLKLMLKSLLANRFALIAHNGTAPMPAYALGVIPGGKPKMTESDGTAQTGCVPHPPPQNEAPGVVSNIVVTCHNMTMETFAEMVHMMAGGYLANPVVDATGLKGSWDFDLTWTGKGQLQKAGADGISIFDALQKQLGLNLELKTAPRAVLIVDSV | |||||||||||||||||||
1 | 3khxA2 | 0.05 | 0.03 | 0.55 | 0.72 | DisCoVER | -----------------------------------------------------GEKGITTFDLVQNKLLITFK--SGERYNM----VPDHAEARVLQGDSTVSGILVLTVEGKAVHGVN-AGLYLLKFLALNLDNNAQAFVTTNIGV---------------------------ITYDNENAGLFGINLRYPP- | |||||||||||||
2 | 2d5wA | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | GDFLRVISNQAKSEIQYLFAPFLIYPKMGERVAKNELYRNFFLKFATALGAMVYKLWIEYFSSVGIWEHIDILKRTRQ--ASEC------S--QYK---NLNT----GAIMVPTKYQGQN----------------------IGGWRNDLTAVEFDPERRKQLFWRAQEIWAEELPALPYFRANP--Y-G-AW- | |||||||||||||
3 | 3fd2A | 0.07 | 0.07 | 1.00 | 0.59 | CEthreader | NRILHIINLQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDRLLEEFLKAGKIESSPTGSGSGSKKNTLQPTEAAYIAGFLDGDGSIYAKLIPRPDYKDIKYQVSLAISFIQRKDKFPYLQDIYDGKRGNLRKDRGDGIADYTIIGSTHLSIILPDLVPYLRIKKKQANRILHIINLYPQAQKNPSKFLDL | |||||||||||||
4 | 2i69A1 | 0.09 | 0.05 | 0.59 | 0.85 | EigenThreader | -------------FNVSGATW----VDLVLEGDSKDK-----------------PTIDVKMMNMEAANLAEV----RSAACPTMGEAHNDKRADP----------AFVCRQGVVDRG------------WGN----GCGLFGKGSIDTCAKFACSTKAI---------------GRTILKENIKYEVAIFVHGP | |||||||||||||
5 | 6ovkR | 0.12 | 0.10 | 0.80 | 0.35 | HHpred | ----VAFDQQARRLVRGEMLITSRPLWVDT--EHGR---------LESTLAQFNVRLHGQ--HTQATVYQ---GS-VALQPALHGEQASFNQQQAVAAVAPAWSQG-MLVAQGQPLAAFIEDLAR----YRRGHLACDPALAGRVSGTFP--LENTD--------KIIAAVAETLQLEVQHFTRYW--VTLKPR | |||||||||||||
6 | 4e9jA | 0.08 | 0.05 | 0.65 | 0.57 | MRFsearch | ------------------------QVSVVSKA--QLSLSEVYQLFLSVMSTH-GFTVVAQGDQARIVPNAA-----------------------------PDRLETRVIQVQQSPVSELIPLIRPLVPQY-GHLAAVPSASHDYSVINLRYGW----------VMDAAEVLNNAMSAQVIADARTNRLIILGPP | |||||||||||||
7 | 3tljA | 0.09 | 0.08 | 0.85 | 0.45 | FFAS-3D | RIKDFVSSLPVEQFVK-----VSETFAVRSFRKGDHTSIDIARTVGEAIFERLSPLVNLDHPAVIFRALGIDTTGDSSLHKRPWRVYDHPAHLK-----------------------ASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAGVQLSQYVDSVDFAISN-- | |||||||||||||
8 | 6csxB2 | 0.08 | 0.07 | 0.87 | 0.69 | SPARKS-K | --------------------SSSFLMVVGVINTGTMTQEDISDYVAANMKDAISFGSQYGENYQPASGLGIKLATGANIRAELAKMEPFFPSGIVYPYLPDEDQGVFMTMVQGATTQKVLNEVTHYYLTKEKESVFAVNGFQNTGIAFVSLKDWADRPGEENKVEAITMRATRAF------SQIKAMVFAFNLP | |||||||||||||
9 | 5jjbA | 0.07 | 0.05 | 0.65 | 0.74 | CNFpred | ------------------------TLGVLVCCPADVDGPALRHDVEAAIRKVLDVSIERS-EPSTHTIFVLGR----PITAA--------------------------------AFGAVAREVAALGVNIDLIRGVSDY-PVIGLELRVSVPPGADGAL-----RTALNRVSSEEHVDVAVED-AKRLIVFDVD | |||||||||||||
10 | 4ra1A | 0.05 | 0.04 | 0.77 | 0.67 | DEthreader | P-RIVNQIFDTARDFFDLVPALAERVMFHDGY-LDFGNKPVKFVVLEAN-DAYKPTAIITGTLIENFHMFLALAALVS-IT--PPD-N------------------------TWMRNW-SN-GQW-MTDAYATI-E-------RWGWKAPFLCVVLGKERDAYNRM-RDIFEEEAPAVILYQPYDEMMEFRNN- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |