Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | NLISTAYGLDPNNVQGGPSWLEMDRFDIVAKAPAKSNQADLKLMLKSLLANRFALIAHNGTAPMPAYALGVIPGGKPKMTESDGTAQTGCVPHPPPQNEAPGVVSNIVVTCHNMTMETFAEMVHMMAGGYLANPVVDATGLKGSWDFDLTWTGKGQLQKAGADGISIFDALQKQLGLNLELKTAPRAVLIVDSV |
1 | 3khxA2 | 0.05 | 0.03 | 0.55 | 0.72 | DisCoVER | | -----------------------------------------------------GEKGITTFDLVQNKLLITFK--SGERYNM----VPDHAEARVLQGDSTVSGILVLTVEGKAVHGVN-AGLYLLKFLALNLDNNAQAFVTTNIGV---------------------------ITYDNENAGLFGINLRYPP- |
2 | 2d5wA | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | | GDFLRVISNQAKSEIQYLFAPFLIYPKMGERVAKNELYRNFFLKFATALGAMVYKLWIEYFSSVGIWEHIDILKRTRQ--ASEC------S--QYK---NLNT----GAIMVPTKYQGQN----------------------IGGWRNDLTAVEFDPERRKQLFWRAQEIWAEELPALPYFRANP--Y-G-AW- |
3 | 3fd2A | 0.07 | 0.07 | 1.00 | 0.59 | CEthreader | | NRILHIINLQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDRLLEEFLKAGKIESSPTGSGSGSKKNTLQPTEAAYIAGFLDGDGSIYAKLIPRPDYKDIKYQVSLAISFIQRKDKFPYLQDIYDGKRGNLRKDRGDGIADYTIIGSTHLSIILPDLVPYLRIKKKQANRILHIINLYPQAQKNPSKFLDL |
4 | 2i69A1 | 0.09 | 0.05 | 0.59 | 0.85 | EigenThreader | | -------------FNVSGATW----VDLVLEGDSKDK-----------------PTIDVKMMNMEAANLAEV----RSAACPTMGEAHNDKRADP----------AFVCRQGVVDRG------------WGN----GCGLFGKGSIDTCAKFACSTKAI---------------GRTILKENIKYEVAIFVHGP |
5 | 6ovkR | 0.12 | 0.10 | 0.80 | 0.35 | HHpred | | ----VAFDQQARRLVRGEMLITSRPLWVDT--EHGR---------LESTLAQFNVRLHGQ--HTQATVYQ---GS-VALQPALHGEQASFNQQQAVAAVAPAWSQG-MLVAQGQPLAAFIEDLAR----YRRGHLACDPALAGRVSGTFP--LENTD--------KIIAAVAETLQLEVQHFTRYW--VTLKPR |
6 | 4e9jA | 0.08 | 0.05 | 0.65 | 0.57 | MRFsearch | | ------------------------QVSVVSKA--QLSLSEVYQLFLSVMSTH-GFTVVAQGDQARIVPNAA-----------------------------PDRLETRVIQVQQSPVSELIPLIRPLVPQY-GHLAAVPSASHDYSVINLRYGW----------VMDAAEVLNNAMSAQVIADARTNRLIILGPP |
7 | 3tljA | 0.09 | 0.08 | 0.85 | 0.45 | FFAS-3D | | RIKDFVSSLPVEQFVK-----VSETFAVRSFRKGDHTSIDIARTVGEAIFERLSPLVNLDHPAVIFRALGIDTTGDSSLHKRPWRVYDHPAHLK-----------------------ASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAGVQLSQYVDSVDFAISN-- |
8 | 6csxB2 | 0.08 | 0.07 | 0.87 | 0.69 | SPARKS-K | | --------------------SSSFLMVVGVINTGTMTQEDISDYVAANMKDAISFGSQYGENYQPASGLGIKLATGANIRAELAKMEPFFPSGIVYPYLPDEDQGVFMTMVQGATTQKVLNEVTHYYLTKEKESVFAVNGFQNTGIAFVSLKDWADRPGEENKVEAITMRATRAF------SQIKAMVFAFNLP |
9 | 5jjbA | 0.07 | 0.05 | 0.65 | 0.74 | CNFpred | | ------------------------TLGVLVCCPADVDGPALRHDVEAAIRKVLDVSIERS-EPSTHTIFVLGR----PITAA--------------------------------AFGAVAREVAALGVNIDLIRGVSDY-PVIGLELRVSVPPGADGAL-----RTALNRVSSEEHVDVAVED-AKRLIVFDVD |
10 | 4ra1A | 0.05 | 0.04 | 0.77 | 0.67 | DEthreader | | P-RIVNQIFDTARDFFDLVPALAERVMFHDGY-LDFGNKPVKFVVLEAN-DAYKPTAIITGTLIENFHMFLALAALVS-IT--PPD-N------------------------TWMRNW-SN-GQW-MTDAYATI-E-------RWGWKAPFLCVVLGKERDAYNRM-RDIFEEEAPAVILYQPYDEMMEFRNN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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