>PF12541 (274 residues) EIKQEYLTGERALFQGADLKIYDSIFADGESPLKESHDIELENCMFKWKYPFWYAKNITA RNCTWFEMARAGVWYTDHITVEDAVIEAPKNFRRCRGVNLKNVNLPNAAETLWNCEDVEL DHVTAKGDYFAMNSRNMVLRDFQLVGNYSFDGVKNMEIHNARMLSKDAFWNTENVTVYDS FISGEYLGWNAKNLTLINCTIESLQGMCYIDNLVMKNCKLLNTTLAFEYSTVDAEVTGKI DSVMNPSGGVIQADSIDELIIEKDKVDPEKTRII |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | EIKQEYLTGERALFQGADLKIYDSIFADGESPLKESHDIELENCMFKWKYPFWYAKNITARNCTWFEMARAGVWYTDHITVEDAVIEAPKNFRRCRGVNLKNVNLPNAAETLWNCEDVELDHVTAKGDYFAMNSRNMVLRDFQLVGNYSFDGVKNMEIHNARMLSKDAFWNTENVTVYDSFISGEYLGWNAKNLTLINCTIESLQGMCYIDNLVMKNCKLLNTTLAFEYSTVDAEVTGKIDSVMNPSGGVIQADSIDELIIEKDKVDPEKTRII | |||||||||||||||||||
1 | 2vbeA | 0.08 | 0.08 | 0.99 | 1.33 | DEthreader | AISILVNYQIQNIDASSGGELFIPSYIVGSTLLIPGGVNIRGVSQLRSVLRLSYDDGRYLRNIRVTGNGIDTNIQVYGWVFDNVVNVETAYLQGLWHSKFIACQAGCRVLHFLQCVSVSVSSCHFSRFIRIQRSEAIILDETCIGFNVYVHDCLDLH-EQLDLCSTVVIENVNGFSFSNSWIAFTIYFRPQSHKIVSGVHINQSIAIESAIFVFVSGCTLTGWAVNIVIECVSFDKCIFNKPLRYSGGVSVTDCYLAGITEV-QKPEGRYNTYR | |||||||||||||
2 | 1dabA | 0.05 | 0.05 | 1.00 | 1.33 | DEthreader | DWNNQSIVKQHGIHIQGVRTASGTTIKVSAQGILLEAELQFRNGSVTSSGTVTVKAKLVADHATLANVGIALYVAGAQASIADSTLQGAGVQIERANVTVQRSAIVDGGLHIGAPSRVVLRDTNVTAAAVSVLASELTLDGGHITGGGVAAMGAVVHLQRATIRRWYVDVSGSSVELAQSIVEAGAIRVGGARVTVPGGSLSAGNIETGPLSITLQAAHAQGKALLYRPVKLTLTGGADAQGDIVATPLDVALAQARWTGATRADNSNVGALRL | |||||||||||||
3 | 2uvfA | 0.13 | 0.12 | 0.95 | 2.32 | HHpred | ----------QAIDSCKRVEIPAGTY--KSGALWLKSDMTLNGAILLGSENPDYP--AGYRLPYSTIERPASIGTFRNIRITGSVIDGNGWLRAKTAEITDEMYGQRRSSTLRGVENVYLAGFTVRPAFHNLENHNVVANGLIHQTYDGFGNSQNVMVFNNFFDTGDDCEPMKGAWLFNNYFRMGHGGAWIEDILAENNVMYLTDGLGGARNVTFRNNAMRDLAKVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEI- | |||||||||||||
4 | 5w6fA | 0.07 | 0.07 | 0.99 | 0.61 | DisCoVER | FLEKDDADNSIAFRFARKIRLRGGVYGMARDIELPAKYEIIGNPEIKYTMFTLTKQGGMFRDLIISSINWMLGRHVQNLDYDRVFFYSATVLNNYHYVNFTRCERWGSAFIGRISESPKFHLCFSSSPIDVWDTADLAITKCTMFGDAVRTRVYPVLITCSVFDVGHAWLGSVYSTITGNLVSAGHGAYIGRSLSLTGNVFTYCNYGLVLEDVGFVGNVFNGNKTGGLGTLCKLSIVGGSMGTQPVGYSDITGILLSGVAFD--EALTTKVYL- | |||||||||||||
5 | 1nhcA | 0.10 | 0.08 | 0.81 | 0.35 | MRFsearch | ---------------GSTITFEGTTSFGYPLIRFGGKDLTVTMAVIDGDGSRWWDSKGTN--GGKTKPKFMYIHDVEDSTFKGINIKNTAISVQATNVHLNDFTIDNSGFDISESTGVYISGATVKNQIAINSGESISFTGGTCSGGRDDNTVKNVTISDSTVSNS-----ANGVRIKTIYK----ETGDVSEITYSNIQLSGITTGIPITDVTVDGVTGTLEATQVYILCG---------------DGSCSDWTWSGVDLS------------ | |||||||||||||
6 | 1bheA | 0.09 | 0.09 | 0.97 | 1.47 | SPARKS-K | SCTTLKADSSKALNNCKAVRLSAGVFLSGPLSLPSGVSLLIDGVTLRAVNNAFENACGVVDKNGKGCDAFITAVSTTNSGIYGGTIDGQGGVKLQDKKVSKLKQNTPRLIQINKSKNFTLYNVSLINSPNFSDGDGFTAWKTTIKTPSDPMSSKNITIAYSNIATGDDNAETRNISILHNDFGTGHETMGVYNVTVDDLKMNGKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-------EKKEGSNVPDWSDITFKDVTSETKENAKKPIEVT | |||||||||||||
7 | 5w6fA | 0.08 | 0.08 | 0.96 | 0.76 | MAPalign | KILVYGMATRDIEL-PAKYEIIGEIKYLTMFTLTGKQGGMFRDLIISSWMLGRHVQNLDYDRVFFYNSA-TVLNNYHYVNFTRCERWGAFIGRASESPKFHLCFSSGSPIDVWDTADLAITKCTMFGDYAVRTRYPVLITCSVFVRGHAWLESVYSTITGNLVSAGSGAYIGRSLSLTGNVFTCGNGLVLVQQSGFVGNVFNGNGGLGTCKDLSIVGGSMGTQVGYSDSTGILLSGVAFDALVYLDTRNKVINCSGVPDTIARGST-------- | |||||||||||||
8 | 3gqnA1 | 0.13 | 0.13 | 1.00 | 0.46 | CEthreader | GRGESLMYNENVTTGNENIFLSSFTLDGNNKRIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGTTHHSQYINILNCYSHDPREIDDGSRHVVLSNNRSKGCYDAPAAYNISINGHMSVEDVQSVSAKNIVASNLVSIRPNAVSAYYGVVINGLTGYTDDPQFRARNCSLNGVVLTGFSNSRGGDAVNISNVTLNNSGRYGVSIGSITNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTVARVA | |||||||||||||
9 | 6k0mA3 | 0.08 | 0.07 | 0.86 | 1.18 | MUSTER | ------------GNGMQNVTVQNIWVEHFVCLYVNSSYNTFKNNRIKNTFAMTNSSYNVIDNNYARGTGDDALFYNVGNKYTNLTATNVRAVYGGSDNLFQNLYGADTLTYPG----ITISSYSFGYNTLGFGDQDTVIDGATLDR----------TGGDFWTSVGADDKINEYQNFGAIWIYG--GDRAIKNILIKNVDINNPVYNMVMQNIRVENVNINNPSR------YGIKLVVRAEQGQGPAY---GGASFTNVKVNNPGISSPNFTVT | |||||||||||||
10 | 2uvfA | 0.13 | 0.13 | 0.98 | 1.51 | HHsearch | PIKPQIVDGQQAIDSCKRVEIPAGTY--KSGALWLKSDMTLNGAILLGSENDDYP--AGYRLERP--ASLIKPGTFRNIRITGSVIDGNGWLRAKTAEITDEGSGQRRSSTLRGVENVYLAGFTVRPAFHNLENHNVVANGLIHQTYDGFGNSQNVMVFNNFFDTGDDCEPMKGAWLFNNYFRMGHGGAWIEDILAENNVMYLTDGGGGARNVTFRNNAMRDLAKVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |