Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | ILYSNESSSHQLLLELLEMLPSLASHSAMVPFIVQTIVPMLQRDRKPVLHATATRLLCKTWEITDRVFGSLQGILQPKAFQDLVYEKNICISMAASIRDVCQKNPDRGVDLILSVSACIESRDPTVKALGFQSLGHLCEADVVDFYTAWDVIAKHVLDYSVDPIVAHGICILLRWGALDAEAYPEASKNVLQILWEVGTSSHSNEYKWAKARTSAFESL |
1 | 1qgkA | 0.13 | 0.13 | 0.99 | 1.33 | DEthreader | | DRPDGQNNLRSSAYESLMIVKYAVQKT-TL-VIMERLQQVLQMDRQNDLQSLLCATLQNVLRVALQISDVVMASLL-RMFQSTAGSGGVQEDALMAVSTLVEVLGEFLKYMFKFLGIGLKNAEYQVCLAAVGLVGDLCRAQNIIFCDVMQLLLENLGNENVHRSVKPQILSVFGDIALIGGEFKKYLEVVLNTLQQASQAQVDDMVYLNELRESCLEAY |
2 | 5frpA | 0.10 | 0.10 | 0.98 | 1.33 | DEthreader | | IATNDNSRLLTVVVKLHKLVLRLWEVPELINAVIGFIYHELSSENEL-FRKEATKLIGQILSYSLNFVSSTFKAWIS-KIA-DISP-DVRVEWTESIPQIIATREDISKELNQALAKTFIDSDPRVRRTSVMIFNVPVTEIWKNI-TNKAIYTSLLHLARERELCINTMAKFYSNSLIERTYKWEIIDTIPSTLYNLYYINDLNIEQVDSVIFEYLLPV |
3 | 2db0B | 0.11 | 0.10 | 0.91 | 1.11 | FFAS-3D | | -----DDDLWTVVKNAISIIMVIAKREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFA---NYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHD--GDEIVRASAVEALVHLATLNDKLRKVVIKRLEEL----------NDTSSLVNKTVKEGI |
4 | 5frpA | 0.11 | 0.11 | 0.97 | 1.33 | DEthreader | | EIHATNNSRLTVVVKLHKLVLRLWEVPELINAVIGFIYHELSSENE-LFRKEATKLIGQILTSSLNFVSSTFKAWISKIAD-IS-P-DVRVEWTESIPQIIATREDISKELNQALAKTFIDSDPRVRRTSVMIFNKVPVTEIWKNITNKAIYTSLLHLARERELCINTMAKFYSNSLNIERTKWEIIDTIPSTLYNL-YYINDLN-INEQVDSVIFEYL |
5 | 2x19B | 0.08 | 0.08 | 0.97 | 1.33 | DEthreader | | WLQPDVPQYFIVLTRLCVALASLALSPAWPCAVAD-VRLFQAGQGRCLALLELLTVLPEEFQSLAVECGAVFPLLEQLLQQPSSPS-CVRQKVLKCFSSWVQLEVP-LQDCEALIQAAFAADLFDSSVEAIVNAISQPDAQRYVLLKLIPLVLGLQEQLRATHGICRIAVALGENHSRALDQHWQSFLALVN-I-FCTGIPG-HYPVNETTSSLTLTFW |
6 | 5f0oA | 0.13 | 0.12 | 0.97 | 1.33 | DEthreader | | YEVLGESSAYKTLVKIGNLTSELWKAPELVGSVTGLLYQLLCSDN-ELFRESATKCVSKMLGTSLNFAVSTYKIWLS-KMA-DI-SPHVRQAWVSEIPSILMSRSDLSDDISKGLAKALIDSDHTVRLSAIQTFHEVPVKRLWECLPNAAVFAGLVHLTRETRECIDAVARIYTESISIPKTKWGVVETIPSACFNL-YYINDLE-INMKVDLLTFEKF |
7 | 3w3tA | 0.13 | 0.12 | 0.95 | 0.77 | HHpred | | --IKNKDLEPPARTTALELLTVFSENQNYGQTLVMVTLIMMTEVSIEVTYDHARQALDRVALKGGYLAAPLFQYLQQMIT---STEWRERFAAMMALSSAAEGCADEIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFSPFIQRILPALISKLTS-ECTSRVQTHAAAALVNFFASKDILEPYLDSLLTNLLVLLQSNKL------YVQEQALTTI |
8 | 4hxtA | 0.12 | 0.12 | 0.98 | 0.70 | DisCoVER | | LVLLT-STDSETQKEAARDLAEIASPASAIKAIVGGVEVLVLLTSDSEVQKEAARALANIASGPDEAIKAIVGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVEVLVKLLTSTDSEVQKEAARALANIASG-PDAIKAIVDAGVEVLVKLLTDSEVQKEAARALANIASGPTSAIKAIVDA-GGVEVLQKLLTSTDSEVQKEAQRALNI- |
9 | 2db0B | 0.12 | 0.11 | 0.89 | 0.33 | MRFsearch | | ---------WTVVKNAISIIMVIAKREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFANYR---IGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHD--GDEIVRASAVEALVHLA---TLNDKLRKVVIKRLEELN-------DTSSLVNKTVKEGI |
10 | 5ifeC | 0.13 | 0.13 | 0.96 | 0.88 | SPARKS-K | | ILYKLDDLVRPYVHKILVVIEPLLIDYYARVEGREIISNLAKANMDEYVRNTTARAFAVVASALG--IPSLLPFLKAVC--KSKKSWQARHTGIKIVQQIAILMGPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAIESFDSVLKPLWKGIRQHRGLAAFLKAIGYLIPLM--DAEYANYYTREVMLILIREFQSPD---EEMKKIVLKVVKQC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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