Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SPASYNCSQSVLPLEHGPIYIPSSYVDNRHEYSTMTFYSPAVMNYSIPGGASNLEGGTGRQTTSPNMLWPAPGHLSPLAIHCQSSLLYAEPQKSPWCEARSLEHTLPINRETLK |
1 | 6w09A4 | 0.08 | 0.06 | 0.77 | 0.70 | DisCoVER | | -------------P--TLSLDYITCEYKKSESCKTEFASAYRAHTFDN----KIVVY-KGDVYNMDYPFGPGQFGDIQSRTPESEDVYANTAPSGFKYWLKERGASLQ------ |
2 | 3iyuX2 | 0.06 | 0.06 | 0.97 | 0.51 | CEthreader | | RNMVYVRSL---AANLNSVICTGGDYSFALPVGQWPVMTGGAVSLHSAGVTLSSLRFRFRLTVEEPSFSITRTRVSRLYGLPAANPNNGKEYYEVAGRFSLISLVPSNDDYQTP |
3 | 4qlzA | 0.05 | 0.05 | 1.00 | 0.63 | EigenThreader | | GSPYFHDVPLFADATNNCYNMIVRWTNAKYIYKGYIWNYGALPQTWEDPSYVDDTKAKGDNDPIDVCEIIWPSGWKVIAINVADPMAEKLNDILDVDAHMPGIRANVTVEDFID |
4 | 1bcpI | 0.09 | 0.04 | 0.39 | 0.26 | HHpred | | ----------VFVRDGQSVCA-SPYEGRYRDMDALDYEDATFQTYALT---GISLCNPA------------------------------------------------------- |
5 | 2nbiA | 0.07 | 0.06 | 0.83 | 1.18 | MRFsearch | | --PMFTPSPDGSPPNCSPTMLPSPSPSATVPLTPAPSSDTCFLPFDDSSRPPDCTDPSVNRPDCDKLS-------TAIDFTCPTCCPTQCRPDNPMFSPSPDGS---------- |
6 | 3cnfB | 0.09 | 0.07 | 0.75 | 0.27 | FFAS-3D | | --VMTPSEGYTQHVDAESI-----MTAPKGKLFHLQFMDGLLMRLIYP--LQPISVARSMRAIVNHNEVDRPREMDTGTLSRNGDLLYSPVANGQ------------------- |
7 | 6f1tg2 | 0.05 | 0.04 | 0.86 | 0.85 | SPARKS-K | | ----VVSCLDWSSQYPELLVASYNNNEDAPHEP-----DGVALVWNMKYKKTTPEYVFHCQSAVMSATFA-KFHPNLVVGGTYSGQI------VLWDNRSNKRTPVQRTPLSAA |
8 | 5nieA | 0.22 | 0.05 | 0.24 | 0.69 | CNFpred | | -----------------LLVLPPSFPYGGMENPCLTFVTPTLLA---------------------------------------------------------------------- |
9 | 4aeeA | 0.07 | 0.05 | 0.81 | 0.83 | DEthreader | | LKIIHIEGFIHKFNG-EIIIRL------NEPLDNEIRE-PL-TKHV-------VGDNI-VY-Q-Y-IIP-SRSILRYRFI-FNYKLFYNSSYIVVNSYIPGPYLSGSPVIILIR |
10 | 2nbiA | 0.18 | 0.18 | 0.99 | 0.67 | MUSTER | | NPSS-QPSECADVLEECPIECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPIPTMLPTNQPTPPEPSSAVIEECPLDTCFLPTSDPAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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