Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QYKNPTHLAQQQEPWSRLSSTPTITSMRRDAYFFDPKVPKDDLDFRLAALYNHHTGAFKNKNEILVHQETIQDTHGIVKMPEEFLPPPPPLPITSL |
1 | 3p0sA1 | 0.05 | 0.04 | 0.91 | 0.62 | DisCoVER | | ------VYGKGIPWERLLMYVLRMFRDYTSLKVEEV--VCFKPTNGLLYAESTLTATKLNQSFVDYMGYNYFEQKCAPQSMPIPPQYFSQYTQIN- |
2 | 3wfoA | 0.10 | 0.09 | 0.94 | 0.83 | DEthreader | | SERDNLKDPIVLKS-AV-ERIHELFKIMKEAHIREYEYVEIIP-IG--LFTDVLKGAFHDIGGIVRGERW-GDEATEFAVRHECDIAPHLLIADAS |
3 | 7cyzA | 0.04 | 0.04 | 0.98 | 0.48 | CEthreader | | PVLGETYERIREDKGFQFFSEQV--SHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSIHNISGQRWIEH |
4 | 3c9vN | 0.05 | 0.05 | 1.00 | 0.48 | EigenThreader | | PMDLKRGIDKAVTAAVEELKELESPKPLLIVKVADIATLTGGTVEDLGQAKRVDTTTIIDGVGEEANTVKGGDGNYGYNAATEEYGNMIDILDPTK |
5 | 2d1cA2 | 0.15 | 0.08 | 0.56 | 0.25 | HHpred | | ---------------------EALGKALEDL--------AAGTPFRLKMISNRGTQVYPPT-----GGLTDLVDHYRCRFLTGEGEAK-------- |
6 | 2pffB | 0.06 | 0.01 | 0.18 | 0.80 | MRFsearch | | ----GMDLYKTSKAAQDVWNR--------------------------------------------------------------------------- |
7 | 2cseB | 0.08 | 0.07 | 0.86 | 0.23 | FFAS-3D | | -----QAALKALEKWEI--------DLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKALAKRNGGIQWMDVSEGTVMNEAVNAV |
8 | 3fikH2 | 0.12 | 0.11 | 0.92 | 1.04 | SPARKS-K | | -----EVLAAANARAEKINALETVTIASKA---GDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVV |
9 | 1zhtA | 0.13 | 0.08 | 0.62 | 0.63 | CNFpred | | ------------PELARMLAVWFISTLKSQYCSRNEGSEKKPLNPFLGELFVGKWENHPEFGETVLLSEQVS------------------------ |
10 | 1yfmA | 0.07 | 0.06 | 0.94 | 1.00 | DEthreader | | RMPLVQTSGTQNSNDTFPTVMIAASLQIQNLIPLIQRVHSLKTLSFLQTAPN----RFEA--LAAHIVSKMIANNSILITDAYSRCEGIKANEPHE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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