Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NTENYDFIKENSFLDAQKNPLSTFSIDVDNASYSNVRRFLNQGQRPPADAVRIEEMVNYFNYDYPQPAGDAPFSVTTELSACPWNKQNQLLH |
1 | 4l11A | 0.03 | 0.02 | 0.68 | 0.64 | DisCoVER | | LVHKGDVLTYLYFI--------ARGSIELGKDDIFGENPCIHSTLGKSNSNVK-A----------------LTYCDLH---KIHRNSLEIT- |
2 | 4uhwA | 0.06 | 0.05 | 0.88 | 0.83 | DEthreader | | VIGALD-ME-HY-SNALSVIEMLKNGFPALITESCITEVAAKGLKVINM--LVPLKGAACSENRT-IIGQIGAFGMYTII-----PLTLNSL |
3 | 1jh9A3 | 0.14 | 0.14 | 1.00 | 0.51 | CEthreader | | GHREIGVIPGPLERNTGAGRLAGFGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGAEMGLRVPQDVSLIGYDNVRNARYFTPALTTIH |
4 | 6xj9A | 0.03 | 0.03 | 1.00 | 0.58 | EigenThreader | | LNLASGVTIDIKNEEQLVDFSILLTAYADKYFSVVNAAMDKYLPNHMYLGAVVKASAKYEGLEFHVGSSDSIHAAHWFPITGRAYDGENYNV |
5 | 3n7zA | 0.13 | 0.11 | 0.82 | 0.30 | HHpred | | -----------GYL-YKIETVEEFV-PLHNEARNGLWNFICQHDLQEPRIVDVEQFLKQYELNW--N--QQEVILHITDSFAQWNNITVRIA |
6 | 4i19A | 0.12 | 0.09 | 0.73 | 0.55 | MRFsearch | | ----------------------PFQVQIPQADIDDLKRRLSETRWPELVWRAAERRINQYPQFTTEI---DGATIHFLHVRSPEPDATPVIT |
7 | 4yy8A1 | 0.15 | 0.08 | 0.52 | 0.32 | FFAS-3D | | ----------------TRDKQGRIFLDRDSELFRIILNFLRNPLTIPKDLSESEALAEFYGIKF---------------------------- |
8 | 4hlbA | 0.15 | 0.11 | 0.73 | 0.81 | SPARKS-K | | DSDRFTAIRSVDVAAYAKGIDIVFVAA-DSAIASRSIRELKERFGF---------------------DKDVPIGAVLDYKK---DAATDTRT |
9 | 2qgmA | 0.09 | 0.07 | 0.76 | 0.59 | CNFpred | | ---------------------TNFAMEEDWGNGLKLNEYIQTGKGNPR-LYPTDEIIAMIEWMNADPSNKKKIQFIGLDLKALDQGSFNKVI |
10 | 3m1cA | 0.06 | 0.05 | 0.93 | 0.83 | DEthreader | | PAYAVPSRLDALAELG----GRALTAVRLFYATAVLRAPFLGAPSQERA-GLITTLPCASLRFDEFILLMTVALVMSVLLVDTDAQQLNVF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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