Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | PGYTAPSPVFRLGGIPLNFRGHWQIARRDMNNNPQIIAVVSPERSFVDQEYDEYADSTSRSVFCFRSVAAIFVVLLFLRHALPVIANRAGSYSFSVFMLWFLRTTAIVLPIYVMMKAM |
1 | 5t4oI | 0.10 | 0.08 | 0.83 | 1.17 | DEthreader | | ----------------LN-A-ILQAAFLFVFA--VWPLMAAEKKEIADGLSAEAKLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRA |
2 | 3zxaC2 | 0.07 | 0.04 | 0.60 | 0.70 | DisCoVER | | AQIGDFAGFSLTLFYEKAPVSGLENADASFSVLGEAAAGSVQWAGVKVARGQGVKMVT----TEEQP---K------G-----------------------KW-QA--LR-------- |
3 | 6m0rA | 0.03 | 0.03 | 0.87 | 0.83 | DEthreader | | PMFSMGYDLWAFS-SYKLLIVYKWVWD-KPAP----GLLNINLSPTIAKVQV-------C-HTASY-LRLWALSLAHAQLSSVLWTMTIFWFALTCLVLMEGTSAMLHSLRLHWVEMS |
4 | 5l9wB3 | 0.06 | 0.06 | 1.00 | 0.44 | CEthreader | | MQTISVGSGGGSIAKVDRSGTRLEVGPRSAGSMPGPVCYDLGGTEPTVTDADVVLGYINPDTYYGGRMPLKAKAEKAIREKIAQPLGIETIEAAALIRYIVDENMASAIKREVHMRGY |
5 | 6l47A | 0.05 | 0.05 | 1.00 | 0.43 | EigenThreader | | KSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKFYVYYIFERLCAPLFSILPGVLILFLTFFAFLHCWLNAFAEMLR |
6 | 2qz5B | 0.19 | 0.10 | 0.53 | 0.27 | HHpred | | PGTLLPRLPSEPGMTLLTIREKIGLKDGQCI-DPYIVSVKDLNGIDLTPVQDPVASREDTYVHF------------------------------------------------------ |
7 | 5l75F | 0.11 | 0.05 | 0.47 | 0.40 | MRFsearch | | ---------------------------------------------------------------SQLAILFILLLIFFCQKLVRILGAAPTNLVLSLLGLGIPEMAQLILPLSLFLGLL |
8 | 6eyuA | 0.08 | 0.04 | 0.53 | 0.48 | FFAS-3D | | -------------------------------------------------------LNQSFLSDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVITGLLAQAQ- |
9 | 2qq4A | 0.13 | 0.12 | 0.93 | 0.74 | SPARKS-K | | DHYQSPRNFGVLPQATKQAGGMN-----PSCGDQVEVMVLLEGDTIADIRFQGQG---CAISTASASLMTEAVALELSRKFQAMVVEGAPPDLLALQGVAKARVKCATLAWHALEEAL |
10 | 4av3A | 0.09 | 0.04 | 0.48 | 0.67 | CNFpred | | ------------------------------------------------------------GADLLESFVGAIVSSIILASYMFPIYVQK-KETIQALISYPIFFALVGLGCSMLGILY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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