Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | KDSPTLPESSVTDMGYYSGQTAHGHHEYYQSQPYGQPMNSYHHQFNLNGMGAAGAYATKSEYPYTNGYRQYGHYNRDHLQAS |
1 | 2pffB | 0.15 | 0.12 | 0.79 | 1.97 | MRFsearch | | -----------DDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------ |
2 | 3bogA | 0.11 | 0.10 | 0.89 | 1.26 | SPARKS-K | | ---------CKGADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGA |
3 | 2cqwA | 0.08 | 0.04 | 0.46 | 0.77 | DisCoVER | | ----AGAQGSCSRCGAQ----------------DGLCS-CHPTCSG-----------------LGTCCEDFYCILP------ |
4 | 6vyvM1 | 0.05 | 0.05 | 1.00 | 0.52 | CEthreader | | RSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLWVFGGGT |
5 | 1zx3A | 0.01 | 0.01 | 0.89 | 0.53 | EigenThreader | | WIENDSGVIYLLESWLKAKSQETGKEISDIFANAVEFNI---VLKDWGKEKLEETNTEYQNQQR---KLRKTYIEYYDR--- |
6 | 2kzyA | 0.17 | 0.07 | 0.44 | 0.19 | HHpred | | TNQTPGPMLCSTGCGFYGNPR----TNGMCSVCYKEHLQR------------------------------------------ |
7 | 1jvrA | 0.15 | 0.07 | 0.48 | 0.70 | MRFsearch | | --APAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQ----------------------------------------- |
8 | 3cnfB | 0.11 | 0.10 | 0.93 | 0.33 | FFAS-3D | | ESIMTAPKGKLFHLQFMDGLLRPEASG--EDMRLIYPLQPISVARSMRAIVNHNEVDRPREMD-TGTLSRNGLYSPVAN--- |
9 | 3boiA | 0.10 | 0.10 | 0.94 | 1.22 | SPARKS-K | | -----CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
10 | 4istA | 0.20 | 0.06 | 0.30 | 0.62 | CNFpred | | ----------------------------GTRSPYGKTPCVFNDKYVSGGSSAG----------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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