Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LKGHWTTKVIEKIGTFHDATSLYERVKKTCKYKYYYNDQVPNHVAVMRMTTSGINCTDACQLFSKVLEEMGYEVKIEHVRVKCNDGKWYGHYLLRVGGFELKDGTIWDYVSATKTGRPLGVPCCTAGFQHLGWGIVGPVYD |
1 | 2q3zA | 0.10 | 0.10 | 0.98 | 1.33 | DEthreader | | GILDICLILDDCRSPVYVGRVGSGMVNCGLLGRWNYVSPMSWIGSVDILRWVKGQCWVFAAVACTVLRCLGIPTRVVTNYNSALIFRWNFHCWVESWM-TREGWQALDPTPQEKSEYDAFVFEVNADIVGLKISTKSVG-- |
2 | 1l9mB | 0.07 | 0.06 | 0.96 | 1.17 | DEthreader | | SICLSILDRSDVRDPKYVGRVLSAMINSGLAGNWGDPRSWDG--SVEILNPVRGQCWVFAGTLNTALRSLGIPSRVITNFNSADVSDVWFHVWNEGWFVRPGGWQVLDATPQERSQDPFIFAENADRNSHTIGTDKY---- |
3 | 3isrB | 0.11 | 0.10 | 0.87 | 2.01 | HHpred | | DKLQKLAYKEFGENVYSKVLAITDWIYNNVEYISGS--TNSQTSAFDTITERAGVCRDFAHLGIALCRALSIPARYFTGYAFKL-NPPDFHACFEAYI--GGNWIIFDATRLV----PL------NGLVKIATGRDA---- |
4 | 4u65E | 0.06 | 0.06 | 0.94 | 1.43 | DisCoVER | | QRIQNLLATQKQVSEMEKLKVVNLFFNKQMRYVEDLWEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVDKLRITYVKALRQNRAHMVLTYYSS-P--DAM-PLVLDSLID---PIKPAAERTDLLPVYSFNAWQDV- |
5 | 4xz7A2 | 0.10 | 0.09 | 0.89 | 0.88 | MRFsearch | | --DDLIHKLIESSSERDKVKAFVQYVANHTTYDWEAINYYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGKNA----EGVPHATARVYY--DKKWHTIDGTGFITKYSEKHFSTI----GEDSYDVVE---- |
6 | 4u65E | 0.09 | 0.09 | 0.99 | 1.92 | SPARKS-K | | QRIDAWQNLLATQSEMEKLKVVNLFFNKQMRYVELWHEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVASKLRITYVKALRQNR-AHMVLTYYSSPDAMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLLSRWQDV |
7 | 1l9mB2 | 0.07 | 0.07 | 0.99 | 1.18 | MAPalign | | DILSICLSILSRNDPKYVGRVLSAMINGVLAGNWTGGRDPRSWGSVEILKNVYGQCWVFAGTLNTALRSLGIPSRVITNNSAHGSDSVWFHVWNEGWFVRYGGWQVLDATPSQGVFQCGPASVIFAEVNAIGRYISTKAV- |
8 | 4xz7A2 | 0.10 | 0.10 | 0.96 | 1.02 | CEthreader | | ANDDLIHKLIESSSERDKVKAFVQYVANHTTYDWEDINYYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGKNA----EGVPHATARVYY--DKKWHTIDGTGFITKYSIGEDSYDVVEAGERNYMIIDSNYE |
9 | 4u65E | 0.07 | 0.07 | 0.96 | 0.95 | MUSTER | | QRIDAWQNLLATVSEMEKLKVVNLFFNKQMRYVELWHEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITYVKALRQNRAHMVLTYYSSPDAMPLVLDSLIDPI------KPAAERTDLLPVYSFNAEGLL |
10 | 3isrB | 0.10 | 0.09 | 0.94 | 2.61 | HHsearch | | DKLQKLAYKEFGENVYSKVLAITDWIYNNVEYISGST--NSQTSAFDTITERAGVCRDFAHLGIALCRALSIPARYFTGYAFKLNPPD-FHACFEAYI--GGNWIIFDATRLVPLN-GLVKIATGRDAAVA--SIFGNA-S |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|