Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VLTDLELESKDQQTLFIKTLPIVHYIAIPEMDNTAEKTIKIQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYETPPLRFRGFVATKSAVTSEAVTIDLKINDLQITLAAYILDNMDYQLLIGNPILRRYPKILHTVLNTRESPDSLKPKTYRSETVNNVRTYSAGNRGNPRNIKLSF |
1 | 5mktA | 0.05 | 0.04 | 0.78 | 0.83 | DEthreader | | ---------------SPVVLTN-YLNT-----QYYGEIGIGTPPQTFKVIFDGSANLWVPSTYESDSSYMENGS-DFTIHY-GSGRV-KGF-LSQDSVTVGGITVTQTFGEVTELKFDGVLGMGPVFDIVFSVYYNRGEVVLGSDPQHY-VDTSISAMDIPPP-G------------ |
2 | 5yq8A | 0.15 | 0.10 | 0.62 | 0.83 | DEthreader | | -------------------------------VTMLYVPCTINQVLVKAFVDSGAQNSIMNKRTAERCGLLVDVRMGVAVGV--G--RQEICGRIMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLKRHQ-MMIDLKNCLTIDNIN------------------------------- |
3 | 3s8iA | 0.13 | 0.09 | 0.70 | 1.64 | HHpred | | -------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRW-AGVAKG--QRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP------------------- |
4 | 5yq8A | 0.15 | 0.11 | 0.72 | 1.36 | DisCoVER | | ---------------------------AKVT--MLYVPCTINQVLVKAFVDSGAQNSIMNKRTAERCGMRLVDVRMRGVAVGVG-RQEICGRIHMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLKRHQMMIDLKHNCLTID----NINV-P-----F-LPEN-------DLAL-- |
5 | 5yq8A | 0.16 | 0.10 | 0.63 | 0.72 | MRFsearch | | --------------------------------TMLYVPCTINQVLVKAFVDSGAQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLKRHQMMIDLKHNCLTIDN--------------------------------- |
6 | 3s8iA | 0.14 | 0.10 | 0.69 | 1.60 | SPARKS-K | | -------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNILVDRRWA---GVAKGQR--IIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVI-GTTGTQTYFLPEGELP------------------ |
7 | 3emyA | 0.10 | 0.07 | 0.71 | 0.84 | MAPalign | | -------------------------HPSDSADSEYITSVSIGTQVLPLDFDTGSSDLWVFTPYPSKSSSKKVSGASWSISYGDGS-SSSG-DVYTDKVTIGGFSVTQGVESATRVVISGLVGATWFSNALFTADGKAALVVFDLGNERLGWAQ------------------------ |
8 | 3s8iA | 0.13 | 0.09 | 0.70 | 0.74 | CEthreader | | -------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVA---KGQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP------------------- |
9 | 5yq8A | 0.15 | 0.11 | 0.73 | 1.28 | MUSTER | | -----------------------------AKVTMLYVPCTINQVLVKAFVDSGAQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLKRHQMMIDLKHNCLTIDN----INVPFLPENDLPALA-------------- |
10 | 3s8iA | 0.14 | 0.10 | 0.69 | 1.57 | FFAS-3D | | --------------------------------TMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGV---AKGQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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