>PF12380 (284 residues) FLVGLVTHEVRTGNATTVEDLNKHPYNKYRKNIVRVYGERGDLNGFLSGKSLHFPRHIFD TCTDNTLTRHIRVTKGEETHDIELLSEEYDATPFIKVESPFAEATELKFAKLQRTQHVYF VTADDIRLGSMSTDGYHNISTKDGDCGSIIFDHLGNVVGAHIVGISCIPPVNGALTWNPE TELLCGPNADYDFDPTKVDPPKVWPVEPVTALSTVLNQLNYVTGDAFTTPKLPTNYQLVG CETLDQYVNACNLVTGQFPQIKEALDDFINGYVANLQRGAEAYN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | FLVGLVTHEVRTGNATTVEDLNKHPYNKYRKNIVRVYGERGDLNGFLSGKSLHFPRHIFDTCTDNTLTRHIRVTKGEETHDIELLSEEYDATPFIKVESPFAEATELKFAKLQRTQHVYFVTADDIRLGSMSTDGYHNISTKDGDCGSIIFDHLGNVVGAHIVGISCIPPVNGALTWNPETELLCGPNADYDFDPTKVDPPKVWPVEPVTALSTVLNQLNYVTGDAFTTPKLPTNYQLVGCETLDQYVNACNLVTGQFPQIKEALDDFINGYVANLQRGAEAYN | |||||||||||||||||||
1 | 6avoC | 0.08 | 0.05 | 0.61 | 0.52 | DisCoVER | TTTLAFKF-----------------Q---H--GVIAAV----D--SRASVNKVIE--IN------PYLLGTMSGCAADCQWERLACRYYLRNGERISVSAA--SKLLSNMMCRLSMGSMICGWDKPGLYYVDEHGTRLS-------------------GNMFSTGSGN--T--YA-YGV---MDGYR---PNLSPEEAYLGRRAIAYATHRD-------------SY----SGGVVNMYHM---K--E------------------DGW--VKVESTDVSDLL- | |||||||||||||
2 | 1ia7A | 0.06 | 0.05 | 0.71 | 0.67 | DEthreader | YALSIFFHDAGD-----------------KFGLPQYSAA--IL-GWSLYEFLFTFYYQYKADPSSPASLTSALMYLNYKACLAKLYAMKANQGLAAAWLTASYIDAEQFIT------TMCWD---DMYVPAALAIYKDAIEFFNYWKQVTTKWLSNWGVLRYAAESM-------VMLVY---CK--------------QNPDQLDKKQVDYILGSYINWCIPHHA-LLT-------GAL---VG--GPDNDKFLDD-----Y---------GL-GVLGAIKFFG | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 1.00 | 0.57 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 2we7A | 0.10 | 0.09 | 0.87 | 0.58 | EigenThreader | TAGVGTVVRTFRSAPRPA--------------GASVVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRYGGGILDVFVEPVSQKTFPQRP-----VAVATVITHPDAQWIGRRLVVHTDEVAGSLGS---SRADA-----AVTDDARGLLAAGRSVSSYAFGAIDFAAAVAQGYRVTVCDARPVFATT------ARFPTADWPHRYLAAQAEATHDPKFDVPLLEVALRLYIGAGSRRTHEDRLARLREAGLTEEELARPEETAVSIAAEIIAKRW--- | |||||||||||||
5 | 3mmgA | 0.21 | 0.14 | 0.65 | 0.85 | HHpred | -------------SKALLKGV--RDFNPISACVCLLENHSERLFGIGFGPYIIANQHLFRRNN-GEL--TIKTMHGEFALQMKPV-EGRD-IIVIKMAKDFPPFQKLKFRQPTIKDRVCMVSESSHIVHKEDTSFWHWITTKDGQAGSPLVSIDGNILGIHSLTHTTNG-SNYFVEFPEKLDAADGWCKNWKFNADKISWGSFTLVE----------------------------------------------------------------------------- | |||||||||||||
6 | 5lacA | 0.19 | 0.14 | 0.76 | 0.35 | MRFsearch | --NPLIKYTTRT------------SVSSLRGAVVN--------------GYIYIQRHLFEFDSAELIGTLIRIPL-----------HDKHSIPHISIHPSYNGPVTLYLSRYDLNKDVLCVHT-------GFSEGHHDIKTVFGDCGGLFD------PKGRLLGLHCAGS--DDVVFDTKSNIWTS-------HPSEIITAKVVYQHPLRNVCATLETLQHLTN--KTNAKLPYDSRLLSNITAEQYNQYGYYI--DYNNFVNNFNRYTTTTITCIKYGLDN-- | |||||||||||||
7 | 5lacA | 0.20 | 0.18 | 0.92 | 0.43 | FFAS-3D | ----------SAASNPSISHIVLEP---VAINPLIKYTTRSSLRGAVVNGYIYIQRHLFEACYNNGKGLLNCKNLERSKYDIELIGHDKHSIPHISIHPDPLSYN--GPVTLYLSRYDTELNKDVLCVHTGFSEGHHDIKTVFGDCGGL-FDPKGRLLGLHCAGSDDVVTTGKSNIWTSHPSEIITLNNEINLP----NPAKVVYQHPLRNVCATLETLQHLTNK--TNAKLPYDSRLLSDFTAEQYNQYGYYI--DYNNFVNNFNRYTTSFETCIKYGLDNKK | |||||||||||||
8 | 5lacA | 0.22 | 0.19 | 0.89 | 0.74 | SPARKS-K | ---------SAASNPSI-----SHILEPVAINPLIKYTTRSSLRGAVVNGYIYIQRHLFENCKNLERSKY-DIDSAELIGTIRIPLHDKHSIPHISHPDP---------LSYNGPVTLYLSRYDDVLCVHTGSEGHHDIKTVFGDCGGL-FDPKGRLLGLHCAGSVVFDTTTGKNIWTSHPSEIITLNNEINLNPAKVVYQ--HPLRNVCATLETLQHLTNKTNAKLYDSRLLSDFN-ITAEQYNQYIDYNNFVNN-FNRYTTSFETCIKYGL--DNKKPDYYN | |||||||||||||
9 | 4hyyA | 0.09 | 0.02 | 0.23 | 0.46 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MELLDYVAAKFHEE----------AGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVF | |||||||||||||
10 | 2x4bA | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | ----LGALSVCFFLETVQLKEWSVT---YGDPYARSL---ANGTWVINELKP----------------HFAGVDWFDPYGNPVLLVLDVGYYVRRDTNGQ-I--EN-SAAMNN--S-IVDLLNWAVGFFDLMGHIMKRTMM---RAKSALQSLTTAHGVGKIYLYGEGWDF-----SFN--IRDINGGLQQQGDTRSLTYQIGNMMALQIKIRYSSP------------LFRLSTDI---VRFHNTIVMGIE-DARGDTNFSYVVELHPVQV-SSDLV-RT--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |