Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IQEISSSLSDEEKRKEEKMLQIIKEYGESLCTKEKQEEIIKAQEIVCDACTYIWRRPEDRASFLIEAYSRYLHSKTVEVSKHGDIDEPLFDYVDHCSLVSTYEKYKSMDIVGELFLRVFLEGKDINDESVNDAVCGV |
1 | 5cwfA2 | 0.11 | 0.06 | 0.53 | 0.65 | DisCoVER | | -----------------------------EMA--KVMLALAKAVLADEVAREIA-------RAAAEIVEALR-----ENNSDEMAKMLLAKRV-LDAAKNND-----DETAREIARQAAEEV--------------- |
2 | 4cmpA3 | 0.08 | 0.07 | 0.87 | 0.83 | DEthreader | | ILI-LAG-SPAIKKGILQTVKVVDELVKMGRH--KPE--N--I--VIE--RQLVETR--QI-TKHVAQILDSRMN--TKYDLI-REVKVITLKSKLVSDFRDFLVVGTALIKKYPKLESYKVYDVRMIFYSNIMNFF |
3 | 6w2wA | 0.10 | 0.09 | 0.99 | 0.70 | CEthreader | | IKEILQEAAARLALKAARLLEEARQLLSKDPENEAAKECLKAVRAALEAALLALLLLAKHPGSQAAQDAVQLATAALRAVEAACQLAKQYPNSDAKKCIKAASEA-AEEASKAAEEAQRHPDSQKARDEIKEASQKA |
4 | 6rowA | 0.07 | 0.07 | 1.00 | 0.53 | EigenThreader | | KYIAGLVTNPAYMGFLVDTITTYMPYGTGYVYVNSREVVEDVKQQTELIMKTFLKKGRRAEKKINEMGYENRESDRTNFLESPASVNAWYAPELNGILTSPAFNFAGSGTVGGHELVHGQGENIADLGGLQASYNAY |
5 | 3e4bC4 | 0.13 | 0.04 | 0.33 | 0.27 | HHpred | | --------------------------------------------------------------------------------------------ICYVELATVYQKKQQPEQQAELLKQMEAGVGTVTAQRVDSVARVL |
6 | 3j9eD | 0.15 | 0.12 | 0.84 | 0.43 | MRFsearch | | --EIPDPLSPGERGIQAKLKELKEKFGKELEEEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGE----------------RTHAETVMVKEYRDKIRDGMQEEAIQEIA----GMTADVLEAASEEV |
7 | 6c0fF1 | 0.12 | 0.11 | 0.88 | 0.73 | FFAS-3D | | ---TPESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIILERNAAYQ--------KEYETAERNIIQAKRDAKAAGSYYVFGKINKQRVPLSDNAIIEANLGKY-GILSIDDLIHEIITVGPHF--KQANNFL--- |
8 | 5cwjA | 0.12 | 0.10 | 0.88 | 0.76 | SPARKS-K | | -------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKEAIRVILRIAKESEEALRQAIRAVAEIAKE----------AQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEADPRVLEEAIRVI |
9 | 5cwfA | 0.16 | 0.13 | 0.82 | 0.64 | CNFpred | | ------------------ALAKAVLLAAKNNDDEVAREIARAAAEIVEALREN--NSDEMAKVMLALAKAVLLAAKN-----NDDEVAREIARAAAEIVEALRENNSDEMALELAKRVLDAAKNNDDETAREIARQA |
10 | 2pgsA | 0.05 | 0.04 | 0.88 | 1.00 | DEthreader | | ----------R--PFHKDHDRIIFSGAFRRLKTTRLTHSLEVSCVGRSLGRVGETRCDPSDL-GVVQATGTYLKYPWTFEQRWARHPVYLE-AAD-DICALIELRGKEHLTNAAARAFVEQDALLVEHH-GPAKRCV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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