Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SEYLLCALWCVVSLYLTYSILDSLMVRWIVKYSTLAAILRMFAMSLLIITTELLLLASLSPNGDYYLHTWILVSCIMTAAYIWQSYLTSNLNYVSQDDYDASEEEADCNTRKELNSTDIEELTSSNVSLNSLPSSCSLQKRKNKRRPQKRFKFTKKRTIDLYNIIVFCVVPVGLASFITMVGLLRN |
1 | 5xu1M2 | 0.07 | 0.05 | 0.69 | 0.67 | DisCoVER | | ---------------------------NLKF-AFIMASLLTMIGIIIGVSSVVVIMALGDSLSQFSFMTTIISSIAGISLFVGGTGVRTREIGKTRANILIQFLIESMILTLLGGLIGLTIASTEVGVSVASLSASVGMIF-GVLPANKASKLDPIA----------------------------- |
2 | 2j69A | 0.04 | 0.03 | 0.84 | 1.00 | DEthreader | | QDLERVAQVRSEMSVCLNKLAETINKAELGGKL--SLERDIEDITIASKNLQQG-VFRGIEMLNFLTRRAIAELRQVRTLARLACNHTREAVARILLRIVFLYNTSPGWAKWAMGL-----AGFDWKNLNSYE------------------EEFNRKNQEDVIAQLQKIEAAYSNLLAYYSHH--- |
3 | 1pv6A2 | 0.10 | 0.10 | 0.97 | 0.61 | CEthreader | | PKLWFLSLYVIGVSCTYDVFDQQFANFFTFFATGEQGTRVFGYVTTMGELLNASIMFFAPINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM-----IFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGP |
4 | 6ww2R | 0.05 | 0.05 | 0.97 | 0.72 | EigenThreader | | CTIVFLLVYFFGMASSIWWVILSLTWFLAAGMKWEAIAGYAQYFHLAAWLIPSVKSITALALSVAGINSLRGFVVLYLLVGTLFLLAGFVSL-----FRARRQLADLEDNWETLNDNLKVIEKADNAKATMKDFRHGFDILVGQIDDALKLANEGKVIGIFTLLYTVPASIVVACYLYEQHYRESW |
5 | 3t9nA | 0.10 | 0.09 | 0.83 | 0.23 | HHpred | | VKFLLDVLKILIIAFIGIKFADFLIYRFYKLYRKIDTLTSLTKRYIIYFLAGASILKLFNID-MTSLLAVAIGSIGFGAQNLVKDMISGFFIIFEQFSVGDYVTI--NGISGTVEGLRVTIRGFSDGLHIIPNGEIK--MVTNL-------T-KDSMMA-----VVNIAFPID------------- |
6 | 6cc4A | 0.10 | 0.06 | 0.63 | 0.42 | MRFsearch | | --FVSYVSGLLTLALAVVTVAGMLAAPWVIMVTLTSQLLKITFPYILLISLASLVGAILNTW--NRFSIPAFAPTLLNISMIGFALFAAPYF-----------------------------------------------------------------NPPVLALAWAVTVGGVLQLVYQLPHLKKI |
7 | 6sqgA | 0.11 | 0.08 | 0.66 | 0.53 | FFAS-3D | | --LNLETCISVVAAFFYSNFIGKLYVDWAITTPIMLLVLVLAFMIILGMNYGMLGTGYLGDIGVIHKTMGTVLGFLFFGGLFYKLNTLRT-------------------------------------------------------------SNASNDLLYGAFFVLWALYGVPRNVGYNVLDLFSK |
8 | 3o7pA1 | 0.07 | 0.06 | 0.92 | 0.91 | SPARKS-K | | IIPFALLCSLFFLWAVANNLNDILLPQFQSAFYFGYFAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-----PESSGHFRLNLAQTSFGAIIAVVFGQSL-----ILSNVPHQSQDVLDKMSPEQLSAYLSVQTPYMIIVAIVLLVALLIMLTKFPA---- |
9 | 3rkoC | 0.07 | 0.05 | 0.65 | 0.94 | CNFpred | | PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ------------------------------------------------------------------LAYQGAVIQMIAHGLSAAGLFILCGQLYE |
10 | 6fj3A | 0.07 | 0.06 | 0.85 | 0.83 | DEthreader | | F-MDLVTFFLFLATNYYWIAVEGLYLHSLIKFSEKKYLWGFTVFGGLPAIFVAVWVSVRATLANTCWLGNKWIIQVPILASIVLNFILFINIRVL---G--IDSFWNEYLTGERSLLSKGMDEG--KEFQEMRFI-FVIIPPIASAVGGLRD---------PLFGVHYIVFMLT-PYT-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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