>PF12326 (186 residues) SEYLLCALWCVVSLYLTYSILDSLMVRWIVKYSTLAAILRMFAMSLLIITTELLLLASLS PNGDYYLHTWILVSCIMTAAYIWQSYLTSNLNYVSQDDYDASEEEADCNTRKELNSTDIE ELTSSNVSLNSLPSSCSLQKRKNKRRPQKRFKFTKKRTIDLYNIIVFCVVPVGLASFITM VGLLRN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SEYLLCALWCVVSLYLTYSILDSLMVRWIVKYSTLAAILRMFAMSLLIITTELLLLASLSPNGDYYLHTWILVSCIMTAAYIWQSYLTSNLNYVSQDDYDASEEEADCNTRKELNSTDIEELTSSNVSLNSLPSSCSLQKRKNKRRPQKRFKFTKKRTIDLYNIIVFCVVPVGLASFITMVGLLRN | |||||||||||||||||||
1 | 5xu1M2 | 0.07 | 0.05 | 0.69 | 0.67 | DisCoVER | ---------------------------NLKF-AFIMASLLTMIGIIIGVSSVVVIMALGDSLSQFSFMTTIISSIAGISLFVGGTGVRTREIGKTRANILIQFLIESMILTLLGGLIGLTIASTEVGVSVASLSASVGMIF-GVLPANKASKLDPIA----------------------------- | |||||||||||||
2 | 2j69A | 0.04 | 0.03 | 0.84 | 1.00 | DEthreader | QDLERVAQVRSEMSVCLNKLAETINKAELGGKL--SLERDIEDITIASKNLQQG-VFRGIEMLNFLTRRAIAELRQVRTLARLACNHTREAVARILLRIVFLYNTSPGWAKWAMGL-----AGFDWKNLNSYE------------------EEFNRKNQEDVIAQLQKIEAAYSNLLAYYSHH--- | |||||||||||||
3 | 1pv6A2 | 0.10 | 0.10 | 0.97 | 0.61 | CEthreader | PKLWFLSLYVIGVSCTYDVFDQQFANFFTFFATGEQGTRVFGYVTTMGELLNASIMFFAPINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM-----IFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGP | |||||||||||||
4 | 6ww2R | 0.05 | 0.05 | 0.97 | 0.72 | EigenThreader | CTIVFLLVYFFGMASSIWWVILSLTWFLAAGMKWEAIAGYAQYFHLAAWLIPSVKSITALALSVAGINSLRGFVVLYLLVGTLFLLAGFVSL-----FRARRQLADLEDNWETLNDNLKVIEKADNAKATMKDFRHGFDILVGQIDDALKLANEGKVIGIFTLLYTVPASIVVACYLYEQHYRESW | |||||||||||||
5 | 3t9nA | 0.10 | 0.09 | 0.83 | 0.23 | HHpred | VKFLLDVLKILIIAFIGIKFADFLIYRFYKLYRKIDTLTSLTKRYIIYFLAGASILKLFNID-MTSLLAVAIGSIGFGAQNLVKDMISGFFIIFEQFSVGDYVTI--NGISGTVEGLRVTIRGFSDGLHIIPNGEIK--MVTNL-------T-KDSMMA-----VVNIAFPID------------- | |||||||||||||
6 | 6cc4A | 0.10 | 0.06 | 0.63 | 0.42 | MRFsearch | --FVSYVSGLLTLALAVVTVAGMLAAPWVIMVTLTSQLLKITFPYILLISLASLVGAILNTW--NRFSIPAFAPTLLNISMIGFALFAAPYF-----------------------------------------------------------------NPPVLALAWAVTVGGVLQLVYQLPHLKKI | |||||||||||||
7 | 6sqgA | 0.11 | 0.08 | 0.66 | 0.53 | FFAS-3D | --LNLETCISVVAAFFYSNFIGKLYVDWAITTPIMLLVLVLAFMIILGMNYGMLGTGYLGDIGVIHKTMGTVLGFLFFGGLFYKLNTLRT-------------------------------------------------------------SNASNDLLYGAFFVLWALYGVPRNVGYNVLDLFSK | |||||||||||||
8 | 3o7pA1 | 0.07 | 0.06 | 0.92 | 0.91 | SPARKS-K | IIPFALLCSLFFLWAVANNLNDILLPQFQSAFYFGYFAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-----PESSGHFRLNLAQTSFGAIIAVVFGQSL-----ILSNVPHQSQDVLDKMSPEQLSAYLSVQTPYMIIVAIVLLVALLIMLTKFPA---- | |||||||||||||
9 | 3rkoC | 0.07 | 0.05 | 0.65 | 0.94 | CNFpred | PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ------------------------------------------------------------------LAYQGAVIQMIAHGLSAAGLFILCGQLYE | |||||||||||||
10 | 6fj3A | 0.07 | 0.06 | 0.85 | 0.83 | DEthreader | F-MDLVTFFLFLATNYYWIAVEGLYLHSLIKFSEKKYLWGFTVFGGLPAIFVAVWVSVRATLANTCWLGNKWIIQVPILASIVLNFILFINIRVL---G--IDSFWNEYLTGERSLLSKGMDEG--KEFQEMRFI-FVIIPPIASAVGGLRD---------PLFGVHYIVFMLT-PYT-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |