Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKEDVQLNRERLDAIRMFSWKLGYGPIDNPEKCNWHFVLTGEVSAQPTQPVKADEVVGVPQPKKVVIPSPPPPPAPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQGAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLEAHPGGPCLPPPPPIQSPPSFYERRREFCRVKSCARAFALETSLGLNRAWVGLVDIPSTSVCC |
1 | 6jelA1 | 0.13 | 0.06 | 0.49 | 0.72 | DisCoVER | | SGVLFVSFNELAIGLEI----SGHRF---------------------------LWVVRSPPF--GFLPFRIRGLLVPSWAVLSHGSTGG--FLTHCSTESIVN--GVPLIVWPL---------------------------------------EQRMNAMLNQGLKVALRP--------------------------NASQRGLV-----------------------------EADEIARVVKELMGARKMRELSD- |
2 | 6m76A | 0.04 | 0.03 | 0.78 | 0.67 | DEthreader | | --------YF-GGGTQQIVNTNNGVA-PNPFYWSYGNGILKDYYELTGKPA-LMPEYGFYEALKT-VIVSLGWTQRH-G-WTGD--GGQWEIRHIPTYSDGGNKEVRDWKTTPKSMP--YNYSIA-ESVDGLPRAALEFPNETPDEKQVW-VDLFTGE--KTPLWKV-PV-FVKDGSIIYPN-GA--T--S--FNMYEATTKINLDLVYYFDKEFQVNLNQSA-NKGTVDGG-----T-------------------- |
3 | 1vt4I | 0.06 | 0.06 | 1.00 | 0.49 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4kvmA | 0.08 | 0.08 | 0.92 | 0.62 | EigenThreader | | ALKCYETKQYKKGLKAIPEHGESLAIKGILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCY----INAHKLEKNNSLSTTNKFSEDDDNSQIEIPTTLLWTYYFLAQHFDHVGELEKAEKYVDLAIDHTELFMTKARISKHKGELQTAMEIMDHARKLINGKCAKYMLRNDENELAAKTVSLFTRNEAVG----------------GAVGDLADMWYMLEDGKSFARQKKFALALKRFSTV |
5 | 2rakA2 | 0.15 | 0.08 | 0.54 | 0.35 | HHpred | | ----------------------------------------------------------TEQYLLAKQLAKPK---EKIPIIVGDYGPM-WVYPTSTFDCVVADPRKGSKMY--GL-KSYYQLT-----PTNT---------------------------N------RSVNHRKHFDWLY------------ERLLVKFGSAIPIPSLPDKQFEEEFIKMRMERLQAWMTCEQQFLNFRKEKRKAEAGTMEPEAP---- |
6 | 5msjA | 0.12 | 0.08 | 0.70 | 0.42 | MRFsearch | | -----------------------PEAQAKVDVFREDLCSKTENLLGSYFPKKISELDAFLKEPA------------LNEANLSNL------------------KAPLDIPVPDPVPCGPVNCNEKI----VVLLQRLKPEIKDVTEQLNLVTTWLQLQPRIEDGNNFGVAVQEKVFELFHTQISKYFSERGDAVAKAA-------------KQPHVGDYRQLVHELDEAEYQEIRLMVMEIRNAYAVLYDI------- |
7 | 3l9oA2 | 0.12 | 0.09 | 0.76 | 0.61 | FFAS-3D | | ------------------------NVKEYHEIEQAIKGYREDVRQVVTHPANALSF-------LQPGRLNGKDNYGWGAVVDFAKRISAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEESICAVSIKSIGNSGQKETVGKSLREVNRRFPDGIPVL--DPVKNMKIEDEDFLKLMKKIDNTKLSSNP----------LTNSMRLEELYGKYSRKHDLHEDMKLKRKI------------------- |
8 | 3k1qB | 0.13 | 0.13 | 0.98 | 0.60 | SPARKS-K | | PSEFGYGSTLQANLFIPSNPTYDSAMSNWISTTIANDLTRRTMTGVMTAMRQCPTELSVLASVTVTPPFQVQNDVITNVLVARVDPAQRGDAAVDATHATFAAALPVDCGQTETNLIPSHHYGKAFAPASNAMFTRNQRAVITREAFVCARSAVAQCPLDALRQFDVTSAAAAEIMHAVNDAFKTAFDLDGDGLALYDPRIADLVVREHVPPGPSH----IHRALQQVESTFMAEMNLFNVARGNLYLVQTATNGNWS |
9 | 3zcnA | 0.09 | 0.07 | 0.83 | 0.68 | CNFpred | | ---------LLEAQGSSEIENIVTTTDKLFQYAQEDSQADPMTKEALRYRTALYQCFTQLS----NRPLCVTTALEICSTIKSVQMDVRKVPG---TSLTNQATGEVIYTPPAGESRDLLSNWEAFLHN-DPLIKMAMAHYQFE-GNGRTGRVLNILYLIDQQLLSAPILYLSRYIVAHKQDYYRLLLNVTTQQ-----------------EWQPWIIFILNAVEQTAKWTTHKIAAARELIAHTTEYV--------- |
10 | 6v6bC | 0.06 | 0.05 | 0.76 | 0.83 | DEthreader | | -----------------------QVNHALAAAMRTLVMILASLATSVDKGECLGGSTLSSAP-----VLEWIHDEFMQQIPSF-LQKMAKRVEIEKFNYSLDLMLHLSRYQFFFMDAEELRKP------V-EDI-LMSGLEAFSFLFRHMFKQMMFVMEPTWHILEKNGFLDTCLKDCMLTLKVFSLMSVCVMFTNCMQKFFETINKF-------------N--FSAHLLDLLARLSI-YSGMA-----SVISL---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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