Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | EQKIPVEPVTTELLTPLPRTPRATVEGEEVDDDAGDSVGTIFREAREQRAADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRKPRVEGEADPAAAPSETPVVVAAAAETPAVTAAEGERAPRKRRRRRNGRPVEGAEPVVASTPVPAPAAPRKPTQVVAKPVRAAAK |
1 | 4k0mC | 0.20 | 0.18 | 0.87 | 1.88 | SPARKS-K | | DQNVRGTSLPHGLGKQVRV--LAIAKGEKIKEAEEAGADYV---------------GGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
2 | 4k0mC | 0.18 | 0.18 | 1.00 | 1.19 | MUSTER | | DETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 3jb9M | 0.05 | 0.03 | 0.66 | 0.78 | DisCoVER | | -NAIARQGH--EHGELVQASFRLLSDEQKQEVANKTKLALQKILSKQIAQSQPKSAVVQQRDDPVYIRYTPSNQMGQALS-------KQRIIK--------MVTA--EQDPMEPPKFRHKKVPRGP-PSPPPPVLHS-------------------------------------- |
4 | 4eatA | 0.04 | 0.03 | 0.80 | 0.67 | DEthreader | | VT------------FAHLLNPDKTAFVDDISSLSLTDWPVAFL-VAVN-TLLTADDYAYLERAQAVLVLKVQRVIVSRPLEPEVDFAFVLP--PA-FW--------LYSSGST--------SAAKYGLGTFPMV-ATTLLMGERPVRWGGVGGVKPTV-LRLASSAGSMLIHGPG |
5 | 3a9uA1 | 0.08 | 0.08 | 1.00 | 0.59 | CEthreader | | DIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFAREDVKVMCVDSAPDGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVA |
6 | 5w3sA | 0.03 | 0.03 | 1.00 | 0.48 | EigenThreader | | NTHNSLILCIRSVISGLQLQQEFVNFFLLHYKKDVSVSDQMEFVNGWYIMIIISDILTIIGSILKMEIQAKSLTSYDVCSILLGTSTMLVWLGVIRYLGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCFCGWIVLGPYHNKFRSKMQQKSYLVWLFSRIYLYSFISLFIY |
7 | 6b40A | 0.28 | 0.11 | 0.39 | 0.34 | HHpred | | --HFPYAPCTNYLHKVIEHVQHVGSVGA-LSSEGNEAGNKLFRQLRLGHARAAGGGGGGGGGGGG--GGGGGGG----------------------------------------------------------------------------------------------------- |
8 | 3u5ch | 0.22 | 0.10 | 0.46 | 0.87 | MRFsearch | | --DVPPPSADPSKARDVTDSATTKKSNTRRATDSAEKEAQADAAAEIAEDAAEAEDAGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------------------------------------------------------- |
9 | 2akhY | 0.14 | 0.13 | 0.95 | 0.42 | FFAS-3D | | --ALGIMPISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFTERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAGQRRIVVNYAKRQQGRRVYAAQS--THLPLKVNMAGVIPA-IFASSIIL--- |
10 | 3jd8A3 | 0.05 | 0.05 | 0.98 | 1.46 | SPARKS-K | | LNKVDIGLDQSLSMPDDSYMVDYFKSISQPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVK--PQSSCCRVPEGKQRPQGGDFMRFLPMFLSDN--PNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFID |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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