Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MSCDDCKTSIFRQKIGRCTRCMWQLTALSVISWPLWWFLYRDTPREVNSIALLFFCSAFSGLLALHLIVLAYRRL |
1 | 1yc9A | 0.06 | 0.05 | 0.91 | 1.33 | DEthreader | | -L-SI-NA---AE-LARLYANQETVHAALQVRNKTVELLEKRYATLGSVSQAKAVAASVEAELLGIQESIQLQKN |
2 | 4phuA | 0.09 | 0.08 | 0.89 | 1.17 | DEthreader | | -------FAPLYAGGGLFFLPLAITAFCFVGCLRALARGSTWAYGSLTHRRKLRAAWVAGGALLTLLLCGP-YSW |
3 | 1jgcA | 0.04 | 0.04 | 0.99 | 1.33 | DEthreader | | QWVRLQEDAKMAKKSPTLECDLAGEHDALKLYREARDYCAEVGDI-VSKNIFESLITDEEGHVDFLETQISLYDR |
4 | 4fi5A | 0.10 | 0.08 | 0.84 | 1.33 | DEthreader | | ---------S--M-TMELQREINAHEGQLVIARQKVRDAEKQYEPKRTLTDREGVAVSIQAKIDELKRQLADRIA |
5 | 2gs4A | 0.03 | 0.03 | 0.99 | 1.17 | DEthreader | | AKLARATSNEKLSAFDLIAAAQKVEHYEIASYGTLATLAEQLGY-RKAAKLLKETLEEEKATDIKLTDLAINNVN |
6 | 6bmlA | 0.09 | 0.07 | 0.72 | 0.28 | HHpred | | ---------------TLWRCCQRVVFITFVVVWSYYAYVVELCVFNGKTVVY---LVAFHLFFVMFVWSYWM--- |
7 | 5ezmA3 | 0.04 | 0.04 | 0.95 | 0.61 | DisCoVER | | PVVATLNANHIPNSFYRAYAVW--VAVAFVVMLLGIAVARLLLGVLPSVAVYAMGMYLGFTVALLGHETVGRP-- |
8 | 4gbyA2 | 0.18 | 0.17 | 0.95 | 0.35 | MRFsearch | | ---FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEI- |
9 | 6vejA2 | 0.08 | 0.08 | 0.99 | 0.82 | SPARKS-K | | LELGDSLHDSATYAYTSTAFPMLTGTLVTVAGFVPIGLN-ASSAGEYTFTLFAVIAVALLLSWIVAVLFAPVIAV |
10 | 4o6yA | 0.04 | 0.04 | 0.99 | 0.58 | MAPalign | | TVHYRGGLALSSDNKDHIFNVHPVMMVIGLLFNGEAMLAYKSVLKKLVHLTLQLTAFILSLIGVWAALKFHIDK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|