Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MIQYGLPILYVIFLWWFSTGAIIYLDGLPQRTYRWSMLGASVLAGIALYALALTAHQETLFGAYVAFTGAIILWGWVEMSFLMGMITGSRRSRCPEGALGWRRFIYAVQAILYHEFALIIAALAIVLVTWGGANMVGLYTFLILWVMRTSTKLNVFLGVRNLNEEWLPDHLRYLESYFRKKPMNLLFPISVTASTIVAVLIVQTAMDPSATTHQVAGATFLAILMILAILEHWFLVLPLPSQALWNWALRSRQP |
1 | 3rkoB | 0.11 | 0.09 | 0.83 | 1.24 | CNFpred | | --MLMWATLMLLGGAVGKSAQQTWLADAMGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQT-------------DIKRVLAYSTMSQIGYMFLALGVQAWDAA-----IFHLMTHAFFKALLFLASGSVILACQNIFMGGLRKSIPLVYLCF------LVGGAALSAAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFH---------------- |
2 | 3vvnA2 | 0.10 | 0.07 | 0.68 | 0.62 | DisCoVER | | MFFLNSVA------------------------------------------------ITAGGNGVAVFTSAWRITMLGIVPILG---MAATTSVTGAAYNVEKLETAYLYAIKIAFMIEVFIMLFAPQVAYLFTIKDLISALRTLPVFLVLTPFGMM---TSAM--F------Q--GIGEGEKSL--LTIFR--TLV-M--QVGFAYIFVTTLG--LRGVWIGIVIG-NMVAAI-VGFLWGRMRISALK------ |
3 | 1n1zA | 0.03 | 0.03 | 0.80 | 0.83 | DEthreader | | -PHQHGYQRKMAATIIVLATVIDDIDVYGTDELELFTDTFKRWDTHN-IS--AY-ILKEHGF--FC-LQYLRKSVVDLVEAYFHEAKW--SGYT-------PSLDEYLNIAKIS---P---S--------SHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGDVPKIQCYMEVEVKFLIREAWKDMNTAIAAGY-P------------FPDGMVAGAANIGRVAQFIYLHDGFGVQHS-------- |
4 | 3mktA | 0.08 | 0.07 | 1.00 | 0.49 | CEthreader | | DVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFKPAMVIGFIGLLLNIPLNWIFVYELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFPKELIRLFRLGFPVAAALFFEVTLFAVVALLVASTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVG-LMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHR |
5 | 6larB | 0.08 | 0.07 | 0.83 | 0.95 | EigenThreader | | WGPTHIARGAALALIGLILVGTGLSVAHRVITQFIVSGIALATVIAALAV-----RNRSA------VLATSLAVTALVPVAAAFALGVPGDFGAP----------NVLLAAAGVAAWSLISMAGS------PDDRG-IAVFTATAVTGVGVLLVAGAASLWVI---------------SSDVIGCALVLLGLIVTVQAAQLSAMWAVLADRVRVSQAHQTGVIAAGVLLGVAGSVALVSSAALLVAFVIGDRYQ |
6 | 2r6gF | 0.15 | 0.11 | 0.71 | 0.27 | HHpred | | -WTVVFSLITVFLTVAVGMVLACLVQWEALRVYRVLLPYAVPSFISILIFKGLFNQSFGEINMTTARTMLIIVNTWLGYPYMMILCMGLLKAIAMDGAGPFQNFFKITLPLLIKPLTPLMIASFA--FNFN--------NFVLIQLLT--------NGGPDGYTDLLVNYTYRI--AFEGQDFGLAAAIATLIFLLVGALAI---------------------------------------------------- |
7 | 3l1lA | 0.09 | 0.08 | 0.87 | 0.32 | MRFsearch | | --DPWVLTITCVVVLWIFVLLNIVGKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAIQSTLNVTLSFIGVESASVAAGVVK-----------NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNGDTAGAIVSFCAAAGCLGSLGGWTLLAAAADDGLFPPIFARVNK--------AGTPVAGLIIVGILMTIFQLSSIS---PNATKEFGLVSSVSVIFTLVPYLYTC----AALLLLGH----- |
8 | 6s3kB | 0.12 | 0.10 | 0.85 | 0.78 | FFAS-3D | | ---YILTVAVSISAGPIAIFLVLVISESASILAYPVYLFVVALLVLIAVGLFKLMTGQTLFLLLKAFSSGCSALGVEAISNAIPAFKNPPAR------NAARTLAMMGILLAILFSGITVLASQIASETFGRNVFYYVIQGVTSLILVLAANTGFS-AFPQLRDQYMPRMFTVR-------GDRLGFSNGIIFLGFASIVLIILFGGQTEHPLYAVGVFIPFTLSQTGMCMKW--------------------- |
9 | 5y78A | 0.09 | 0.08 | 0.94 | 0.95 | SPARKS-K | | TLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLKLIKALIWPSLGHTLGHAATCMSFSLVAI-------------SFTHVVKSAEPVFGAVGSALVLGVALSAATELTFTITAMISNVAFVTRNITSKFTMVDF--KNEKTLIAQNTYALITIIFPPLVSGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLY |
10 | 3rkoC | 0.14 | 0.13 | 0.93 | 1.21 | CNFpred | | LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI-----DMFLFFFFWEMMLVPMYFLIALWGHK--------ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYWTFNYEELL-VEYLLMLGFFIAFAVKMPVV--LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG-KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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