>PF12288 (425 residues) PSRALVLARREAQSKHGKTAANQPTSAASVARQGDPDLSSREISQRVRELRSKSGSTDKK RSGACRPCGPNRNGSKQAVAADAHWKVGLSETNTGQFVTGTQANRSSKTTGNEASTCRSI TGTQYLGSEVFDAFCQSSPQPGQPLKVAVTNTSHGNRVTGNEVGRSEKVTGDEPGTCKNL TGTEYISANQANQYCGVSQPSPRKVGQSITEDGRKVSGVMVGRSERVTGDEAGSNRQLTG DQYLGADPLPEGRPAEKVGSFHTLRGAGVTGTNVARSEYVTGNEPGSCKRVTGDEYVGTQ QYKTFCGGKPNPEAAKVGLSLTNKSQTVSGTLTGRSELVTGDEPGTCKAVTGTPYSGVEQ ASGWCDTNSVREIQDRTPKLLGTPGAVMTGLQPGVGGVMTGAEKGACEPLTGTPYVGGDQ LVQAC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PSRALVLARREAQSKHGKTAANQPTSAASVARQGDPDLSSREISQRVRELRSKSGSTDKKRSGACRPCGPNRNGSKQAVAADAHWKVGLSETNTGQFVTGTQANRSSKTTGNEASTCRSITGTQYLGSEVFDAFCQSSPQPGQPLKVAVTNTSHGNRVTGNEVGRSEKVTGDEPGTCKNLTGTEYISANQANQYCGVSQPSPRKVGQSITEDGRKVSGVMVGRSERVTGDEAGSNRQLTGDQYLGADPLPEGRPAEKVGSFHTLRGAGVTGTNVARSEYVTGNEPGSCKRVTGDEYVGTQQYKTFCGGKPNPEAAKVGLSLTNKSQTVSGTLTGRSELVTGDEPGTCKAVTGTPYSGVEQASGWCDTNSVREIQDRTPKLLGTPGAVMTGLQPGVGGVMTGAEKGACEPLTGTPYVGGDQLVQAC | |||||||||||||||||||
1 | 6g4bA | 0.07 | 0.05 | 0.71 | 0.67 | DisCoVER | ---KGYIEAMALWSTLPFYHLFS--HRPSIELAVPMSKVFF-TN-----------------SGSEANDVVVWGKPAKKKFI-SRVNGYHGITVASASLTGLPNQRGFDLPL--PGFLHVGCPHADRLAVELEQKIPETIA--AFI-GE----PL---MGAG--------G----------VIVPPRYWEKIQKVCRKYDILVIADE------------VICGF-GRTGQMFGSQ--------TFGI--QP---DIMVLSKQLSSSYQPIAAILINAFTGSGHPV-------ATAVALNLKIIEE------ESLVEHAAQM------GQLRLQPLVG-EIRGCG-----LIAAVELV-G-DRVSK----AP--YQALGTLGRYM------AGRAQH-GMITRA--MGDAVAFCPRFRALDDTTQV- | |||||||||||||
2 | 2eidA | 0.07 | 0.05 | 0.69 | 0.67 | DEthreader | ASAPI-G-----------------------------------------------K-----------PPHTYTID-MKTT-QNVNGLSM-LPRQNGWIGRHEVYLS-----GTNWG-SPVASGSWKYSN-LI-EINVFQASSYTAWGPTIDLP---IVPA----------AAIEPTSGRVLMWSNLTSSWD--TGI-S-DRT----VTV-------TKHDMPGISMGQIVVTGAKKTSLYDSSDSWI--PGPDMQVARGYQSSA---FTIGGSGSGVF--MLTADKQGL-RSD-NHAWLSV-Q--PSTAMNSGKRQANAVMYDAVKGKILTFGGS-SDATTNAHFAGLYFHTSVVTFIYVPEQDTF-------Y-KQNPNSIVRVYHSISLLL------NGGGG----TNHFDAQIFTPNL-GN-- | |||||||||||||
3 | 6jciA2 | 0.08 | 0.08 | 0.96 | 0.52 | CEthreader | ELVEDYHGTKVTEYYRWLEDPDSEETKAFVEAQNELSKPFLDACPIREKLSSRITEVWDYPKYSCPGRHGEYFYYYHNTGLQNQSVLYAQKGLGADPSVFLDPNSLSEDGTVSLRGTAFSENDQFFAYGLSKSGSDWVTIKFKKAPSGEDLPDTLERVKFSSMAWTHDHKGLFYNRYLEQQGKSETTMNVDQKLFYHRLGTDQSEDVSVLEWAACVNKDKLILCYLKDVKNELYVHGLSSGSRMSQ------LPLEVGSVVGYSGKKKYDEIFYQFTSFLTPGIIYRCDMTTDTYTPKTFREIKVKDFDTSQFETEQVFFPSKDGTKIPMFIVHRKGLVHDGSHPVMLYGYGGFNISITPSFSPSRLVFLQHL----------GGVYAIANIRGGGEYGESWHKAGNCANKQNVFDDFQSAAQYL | |||||||||||||
4 | 6gmhQ | 0.09 | 0.09 | 0.95 | 0.68 | EigenThreader | GGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDFEKVLKAYPNNYETMKILGSLYAASEDGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLA | |||||||||||||
5 | 5ebzA | 0.10 | 0.04 | 0.46 | 0.30 | HHpred | ----------------GTGGFGNVCLDLKIIKSCRLELSTKNRERWCHEIQIMK-KLNHANVVKACDV---------------PEELNI--LIHDV-----------PLLAMEY--CSGGDLRKL--LNKPENCCGLKESDLKPENIVLQD-VGGKIIHKIDLGYAKDV--DQGELCTEFVGTQYLAPELFENIAGYRPHHLQPFTWHEKIKKKD-------------PKCIFACEEMSGEVRFSSHLPQPNWDPQQRGGPV------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6gmhQ | 0.17 | 0.08 | 0.50 | 0.35 | MRFsearch | -----------------------------------------------------GGGGGGGGGGGGGGGGG------------------------------GGGGGGGGGGGGGGGGGGG------------------------------------GGGGGGGGGGGGGGGGGGGGGGGG----------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAES | |||||||||||||
7 | 3j25A | 0.10 | 0.09 | 0.93 | 0.47 | FFAS-3D | --STVYQDIKEKLPNVCVTNFTESEQWDTVIEGNDKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDNLIEVITNKFYSSTRLAYIRLYSGVLHLRDSVGELCKIDRAYSGEIVILQNEFVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLSDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPN-PFWASILGSGMQYESSVSLGYLNQSFQRYGCEQG--LYGWNV-TDCKIC-FKYGLYYSPVSTPPIVLEQVLKKAGTEPYLS-FKIYAPQEYLSR-AYNDAPKYCANIVDTQLNNEVILSGEPARCIQEYRS--------------DLTFFTNGRSVCLTELKGYHVTTGEPV--CQPRRPNSRIDKVRY---- | |||||||||||||
8 | 6f1tg | 0.10 | 0.08 | 0.86 | 1.42 | SPARKS-K | -----------------------LTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIKLSLNRQFFDERWSKH------RVVSCLDWSSQYPELLVASYNNNEDAP-----HEPDGVALNMKYKKTTPEYVFHCQSA----VMSATFAKFHPNLVVGGTYSG-QIVLWDNRSNKRTPVQRTP-----------LSAAAHTHPVYCVNTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSK---AVAVTSMSFPVGDVNNFVVGSEEGSKAGISEMFEGHQGPITGIHCHAA---VGAVDFSHLSFDWTVKLWSTKNNKPLY-SFEDNAGYVYDSPTHPALFACVDGMGR----LDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYEQIAVPRNDEWARFG | |||||||||||||
9 | 3szpA | 0.12 | 0.03 | 0.24 | 0.19 | CNFpred | PVATITRRIQALEDSLNLRLLN-------HARKLTLTEAGERFYKDCSPLLERLASM-------------TEEITDECRGASGRIRISAPSNLT-----------------------------KRMMMPMFNAFMEKYP----DIHIELMMSN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5gm6B | 0.05 | 0.03 | 0.69 | 0.67 | DEthreader | ------------QLKEIERKEKIQHELG-INIDSLK---------------------KPQYDADAYEKVLESI------NEGNQIIVFVHSRK-ETSRTAWLK----HKLTKLIESGIGTH-HAGLTRSDRSL-SEDLFAVNLPAVII-------SPQDVQMLGRAGFGEGIIITNVQYY-LSVLNQQ-----------L-PIES------------QFVSKLVDNLNAEVVICRAVNWLTRESLHSALYADVIEANSFKDVEHISFNFSMLQMAFEASAAAAGNNSSSVFLPSRKDCMEVASAFMAPLILYKSKDCSA-----------------TNLYDGAEH----------------PTESYLQYIIHDTLNNEIAN---------SFI-----IISTLSNGLIAYVVVDAWAIKK----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |