>PF12281 (214 residues) LTGDVVEAMATAGIFRLRGVLVGTVAFQTYAGHLGVRLPGASLQTGDADFAQHYSISSSV EDSLPPILEILRSVDPTFREIPHRSDPLRVTQFQNASRYKVEFLTPNRGSDDYTDNASPM PALGGASAQPLRFLDFLIHEPIRTVMLHRSGVPVTVPSPQRYAVHKLIVASRRQSDPNGI AKREKDIYQASLLVEALHATRRQDDLAEVFAEAW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LTGDVVEAMATAGIFRLRGVLVGTVAFQTYAGHLGVRLPGASLQTGDADFAQHYSISSSVEDSLPPILEILRSVDPTFREIPHRSDPLRVTQFQNASRYKVEFLTPNRGSDDYTDNASPMPALGGASAQPLRFLDFLIHEPIRTVMLHRSGVPVTVPSPQRYAVHKLIVASRRQSDPNGIAKREKDIYQASLLVEALHATRRQDDLAEVFAEAW | |||||||||||||||||||
1 | 6j7nA | 0.12 | 0.10 | 0.79 | 1.00 | DEthreader | AMIVVAQFAAT-LTDGAPLLVKGGSSLELRRG----IPDS--RTSKDFATVARR--DI-EL-IHEQLADAGEGTAI-FTAPEEIDV-VKPRRFTAKATVPIEVSSV-------------------------E--AGNADQFDTLTSDALAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVND-RAHDLVDLQLLEGLL--LDA--DLMPTRSACI | |||||||||||||
2 | 4wseA | 0.12 | 0.09 | 0.77 | 1.00 | DEthreader | SISRIKTEFSDNKLN-ESFLISGIEAYNFYIRHAASLNN-FIANVPFSELISVN-YR--E--DVKNTYNFLRMIVEDKISVDEYFP-GYSTVIKYDDHPIIRIYEGDG--------------------------Y--CIPNVKTVKT-V-----KYVSFQYVLMILYINKFRAHLDK-NKPMYFNYGIAISNLVKARNIYLDKSVF-EF----- | |||||||||||||
3 | 4wqkA | 0.14 | 0.11 | 0.79 | 1.14 | HHpred | LIHKILAAADERNL---PLWIGGGWAIDARLG----R---VTRKHDDIDLTFPGE-------RRGELEAIVEM--LGGRVMEELD---YGFLAE-IGDELLDCEPAWWADEA----Y-EIAEA--------PQGSCPE--AAEGVI---AGRPVRCNSWEAIIWDYFYYADEVPP----VDWPTKHIESYRLACTSLGAEK-VEVLRAAFRSRY | |||||||||||||
4 | 5uvdA | 0.13 | 0.10 | 0.78 | 1.14 | DisCoVER | ELKTVVSVLAQK--LDIDYAIMGGAATCLL-----SGD-PNRR-TEDVDLVIHVDHKITADNLTTQLLK---SF--PSDFEGVSQFGHTIPAYKLRQLVELEVFDY-------------Q-SWP-----QRPQY--DLATRT--TLNINGQKVK-LFSPEWILREKILSQYQR----QGSRKEGTDIRDIISMIPLA--VPGKPEL--NFNQL- | |||||||||||||
5 | 5uvdA | 0.14 | 0.11 | 0.78 | 0.87 | MRFsearch | --SVLAQKLDSLN---IDYAIMGGAATCLLSGD-------PNRRTEDVDLVIHVDHRK---ITADNLTTQLLKSPSDFEGVSQFGHTIPAYKLRRPTVQLVELEVF--------------------------QYDLQTATRTTLNIN---GQKVKLFSPEWILREKILSQYQRQG----SRKEGTDIRDIISMIPLAVPVQKRPDLSSALKAKI | |||||||||||||
6 | 5uvdA | 0.14 | 0.11 | 0.82 | 1.31 | SPARKS-K | VVSVLAQKLDSLNI---DYAIMGGAATCLL-------SGDPNRRTEDVDLVIHVD-----HRKITALTTQLLKSPSDFEGVSQFGHTIPAYKLRRGTVQLVELEVFDY--QSWPQRP-----------------QYDLQTATRTTLNIN-GQKVKLFSPEWILREKILSQYQRQGSRK----EGTDIRDIISMIPLAVNFNQSQELQTALANLV | |||||||||||||
7 | 6y5uA | 0.14 | 0.11 | 0.79 | 1.13 | MAPalign | AMIVVAQFAATLTDGAPLLLVKGGSSLELR-------RGIPDSRTKDFDTVARR--------DIELIHEQLAGWEGFFTPEEIPGMPVKPRRFTAKLTVPIEVSSV---------------------------EAGNADQFDTLTSDALAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRA-HDLVDLQLLEGLL-LDADLMPTRSACIAIF | |||||||||||||
8 | 4wqkA | 0.12 | 0.10 | 0.79 | 1.08 | CEthreader | LIHKILAAADERNL---PLWIGGGWAIDARLG-------RVTRKHDDIDLTFPGE-------RRGELEAIVEMLGGRVMEEL------DYGFLAEIGDELLDCEPAWWADEAY------------------EIAEAPQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPV----DWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYA | |||||||||||||
9 | 4wqkA | 0.14 | 0.11 | 0.79 | 0.94 | MUSTER | LIHKILAAADERNL---PLWIGGGWAIDARLG-------RVTRKHDDIDLTFPG-------ERRGELEAIVEML--GGRVM----EELDYGFLAEIGDELLDCEPA-----WWADEAYEIAEAPQ-------------GSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYAD----EVPPVDWPTKHIESYRLACTSLGAE-KVEVLRAAFRSRY | |||||||||||||
10 | 4wqkA | 0.13 | 0.10 | 0.79 | 2.30 | HHsearch | LIHKILAAADERNL---PLWIGGGWAIDARLGR-------VTRKHDDIDLTFPGE-------RRGELEAIVEM--LGGRVMEEL---DYGFL-AEIGDELLDCEPAWWADEA--YEIAEAPQGS-----CPE--------AAEG---VIAGRPVRCNSWEAIIWDYFYYADEVPP----VDWPTKHIESYRLACTSLGAEK-VEVLRAAFRSRY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |