Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AERFALRVTARLSSGTAELPYDISERLRASRMQALAKRKVTAPVRRTAPATVVVGAGPVATLGRGSEGGSWWNALVSAVPLLALVVGLVVINAAQDERSANDVAEVDAALLTDDLPPAAYADPGFVQFLKT |
1 | 2w6dA2 | 0.04 | 0.04 | 0.93 | 0.64 | DisCoVER | | LTGIRDEFQKEIINTRDTQ-------ARTISESFRSYVLNAALQKAFEQYITSAWTLTAEKGNLAGFAAGFDWKNILLNYFTVIGIGGIIVKTAKKELVKHLPQVAHEQSVYNAVKECFDYEREVSKRI-- |
2 | 4aw6A | 0.04 | 0.04 | 0.92 | 1.00 | DEthreader | | LGQIMSETFEKSRLYQLDKSTSFSG--E----SNAYLLVLLGEL-HWKGTVKNIIISQMNFLCFLFAFQFYNEVLSFCLTVLSRRFEFQADAFAKKGKAKDLYSALIKLNKDNLG---FPVSDFSMYHPER |
3 | 6gmhQ | 0.07 | 0.07 | 1.00 | 0.46 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5n9jG | 0.05 | 0.05 | 0.96 | 0.50 | EigenThreader | | EYQRAIDSIEECLNKQLRLDQYVLIENWTSLVGHLKTLHSLISNYTNGRELQNEISSLLKQDKELDLQIQDCMREMTSIY-----DETLLDYGRKLSKFSSEDQMRKTLLFQFSTSMVPNLSATASQLFSE |
5 | 5l2rA1 | 0.16 | 0.13 | 0.82 | 0.28 | HHpred | | PEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDVATTLLKNACIAAGLPS--CQDTGTAIVRGELWTGGED----EK-----YLSKGIWN-AYRYHNLRYSQTAAL--DMFGDNLPAQLDLL--------- |
6 | 2w6dA2 | 0.14 | 0.14 | 0.98 | 0.63 | MRFsearch | | --AWTLTAEKDINAAFKELSRSASQYGASYNTDQITEKLTGKDVEDNSPGWAKWAMGNLAGFALAGAGFDWKNILLNYFTVIGFALLGLGVGFLQADQARRELVKTAKKELVKHLPQVAAVKECFDSYERE |
7 | 6jlwJ2 | 0.14 | 0.14 | 0.95 | 0.53 | FFAS-3D | | -KVFQNEVLGTLQRGKEENCDNLVLEINSLKSHVVLEFPLQQMDSPLDSSRYCALLLPLLKAWSPVFRNYIKRAADHLEALAAIED-----FFLEHEALGISMAKVLMAFYQLELAEETILSQRFIQWLKE |
8 | 6w2wA2 | 0.11 | 0.08 | 0.75 | 0.69 | SPARKS-K | | AVRAALEAALLALLLLAKHPVQLATAALRAVEAACQLAKQYPNSD--------------------------IAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERA------- |
9 | 4akkA | 0.07 | 0.06 | 0.84 | 0.63 | CNFpred | | -----AALRKRVRDREI-AAEEATGQFSRIIRHLLNIV------------PQLNDSIDDPQIAGR---MVALYSFMQGKELAGQERALGALGFARGQFSDELRQQLVDRIDGQQPCFDSFAQPPQTALFAE |
10 | 7c4jB | 0.09 | 0.07 | 0.75 | 0.83 | DEthreader | | -------------------KSPEQCILRFLQLPIEDKLYGDGNGL-GLVNPKTVQSMTRAISESKSATNEERQMNFLTNELIRLQMEKLDAKLNHLKKLEKFMELERKTLERQQELL------I------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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