>PF12269 (234 residues) ATNRIYQVLPQRIQEWSLTPCIAEQNNRRQLETIRKQQHDVRRILQELDKRHAELDRIIE RAKHATIDPQAEVDDNDDTEMSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKT RIEGQVMFCDFYNPANRTYCKRLRVLCPEHCKDPKISETEVCGCPLVTNVFDTTGEFCRA PKKSCVKHYVWEKLRRAEIDMERVRQWLKIDELVEQERQIRANMATRAGVLALM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ATNRIYQVLPQRIQEWSLTPCIAEQNNRRQLETIRKQQHDVRRILQELDKRHAELDRIIERAKHATIDPQAEVDDNDDTEMSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKTRIEGQVMFCDFYNPANRTYCKRLRVLCPEHCKDPKISETEVCGCPLVTNVFDTTGEFCRAPKKSCVKHYVWEKLRRAEIDMERVRQWLKIDELVEQERQIRANMATRAGVLALM | |||||||||||||||||||
1 | 6vhfA | 0.05 | 0.03 | 0.50 | 1.04 | DisCoVER | --------------------------A--LTPEEYAELTASAETRSKLSEQIALCRQMLQLI--ELA-----------------IRRAAIAAG---IPGIT--K--------DICG----------YDTRLDTVQDPRTAGMC--LRKKC--------KPHNGWGLT-----------------------TVRHDIRELALQIRELLEAEQRV---RDGAAGR----------- | |||||||||||||
2 | 6vhfA | 0.18 | 0.11 | 0.59 | 1.19 | HHpred | -----------------------TPEEYAELTASAETRSKLSEQIALCRQMLQLIELAIARREAAIAAGIPG----------ITKDICGYDT------------------RLDTVG-------AAHQFSLFLQS-------------PQGQS-----------------QDPRTAGMC--LRKKCKPHNGWGALLTKTVRHDIRELALQIRELLEAEQRVRDGAAGRF------ | |||||||||||||
3 | 6fkfg | 0.04 | 0.03 | 0.68 | 0.83 | DEthreader | ----------------LRELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEYNNEQTDVDVPLK----ALMVV-KAIIVLFEEVDKVE--M---------------------KFVSLVKSD---PVIHLICDVDEDMIKTE---F--------------------AQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNANELKKTLNY----- | |||||||||||||
4 | 4rsjA | 0.07 | 0.06 | 0.94 | 0.72 | CEthreader | ---------------VVEDKRAEISEIEGKLSTIQAKRIKVEKEIEAKSNELEKVSKELESSEREAAEELKRSGIGGIYGTLAELIVALGNRADNVVVEDELVAEKAIKYLKEHKLGRLTFLPLNKIKPKHVDSSVGLPAVDVIEYDQKIENAVKFALGDTVIVNSMEEARPHIGKVRMVTIEGELYERSSLRRRKEALEGELNSLKIELRSLENASFELRIKLSDEKKELELA | |||||||||||||
5 | 6oisC | 0.04 | 0.03 | 0.84 | 0.68 | EigenThreader | --------NSKRLESDLEAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLN---------------DINAQILRHENS------AAGVLSLVETLSNYLGTRSMLAVVCRNREIGDSFDAICLYLLCVTSYGYGLRETLFYNLF------SRLQVYKTRADMISAL---PCISDGAVSLDGGIIRKTMDNYSEAEKKMKELKWKKEKTLEDIKREQHAVFNFGKKKEEF | |||||||||||||
6 | 5vf0B | 0.26 | 0.05 | 0.18 | 0.46 | HHpred | ------------------------------------------------------------------------------QVTKVDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKR----------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6vhfA | 0.18 | 0.09 | 0.51 | 0.55 | MRFsearch | -----------------------TPEEYAELTASAETRSKLSEQIALCRQMLQLIELAIARREAAIAA------------------------------------------------------------------------------------GIPGITKDICGYDTGQSQDPRTAGMCL--RKKCKPHNGWGALLTKTVRHDIRELALQIRELLEAEQRVRDGAAGRF------ | |||||||||||||
8 | 6vhfA | 0.16 | 0.09 | 0.59 | 0.97 | FFAS-3D | -----------------------TPEEYAELTASAETRSKLSEQIALCRQMLQLIELAIARREAAIAAGIPGITKD----------ICGYDTRLDTVGAAHQFSLFLQSPQGQ---------------------------------------------------------SQDPRTAGMCLRKKCKPHNGWGALLTKTVRHDIRELALQIRELLEAEQRVRDGAAGR------- | |||||||||||||
9 | 6vhfA | 0.18 | 0.11 | 0.59 | 0.79 | SPARKS-K | ---------------------ALTPEEYAELTASAETRSKLSEQIALCRQMLQLIELAIARREAAGIPGITKD-------------ICGYDTRLDTVGAAHQFSLFLQS--------------------------------------------PQGQSQD-----------PRTAGMC--LRKKCKPHNGWGALLTKTVRHDIRELALQIRELLEAEQRVRDGAAGRF------ | |||||||||||||
10 | 5j1iA | 0.12 | 0.09 | 0.70 | 0.58 | CNFpred | GTQGAEEVLRAHEEQLKEAQAVPLEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGE----------RDVEVERW--------RERVAQLLERWQAVLAQTDV------------------------RQRELEQLGRQ----------------------------LRYYRESADPLGAWLQDARRRQEQIQA-DSQAVREQLRQEQALLEEIERHGEKVEEC | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |