>PF12264 (197 residues) EQAFQDEEKRTVDPNISDMYNAIKSEYLVKSFSWKVSDGQDKVLSNINIPEDLWNTNSRL NDIMSYFQYYKATGLTFRISTTCIPMHGGTLFAAWDACGCATRQGIATAVQLTGLPGIMI EAHSSSLTTFSVEDPLTQSTVCLSGSEHSFGRIGILKICCLNVLNAPQAATQSVSVNVWV KFDGVKFHFYSLKKQPV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EQAFQDEEKRTVDPNISDMYNAIKSEYLVKSFSWKVSDGQDKVLSNINIPEDLWNTNSRLNDIMSYFQYYKATGLTFRISTTCIPMHGGTLFAAWDACGCATRQGIATAVQLTGLPGIMIEAHSSSLTTFSVEDPLTQSTVCLSGSEHSFGRIGILKICCLNVLNAPQAATQSVSVNVWVKFDGVKFHFYSLKKQPV | |||||||||||||||||||
1 | 1b35B | 0.16 | 0.15 | 0.93 | 1.33 | DEthreader | PSTT---I------RIHSIKDFLSRPIIIATNLWSVSDPVEKQLYTANFP-EVLISNAMYQDKLKGFVGL-RATLVVKVQVNSQPFQQGRLMLQYIPYAQRVTLINETLQGRSGCPRTDLELS--VGTEVEMRIPYVSPHLYYNLITGQ-GSFGSIYVVVYSQLHDQVSGTGSIEYTVWAHLEDVDVQYPTGANIQA | |||||||||||||
2 | 4qpgB | 0.14 | 0.13 | 0.88 | 1.17 | DEthreader | -----------SVDKPGSKKTQGEKFFLIHSARWLTTHALFHEVAKLDVVKLLYNEQFAVQGLLRYHTYAR-FGIEIQVQINPTPFQQGGLICAMVPGDQS----YGSIASLTVYPHGLLNCNI--NNVVRIKVPFIYTRGAYHF-KDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFT-DLELH-GL-TP-- | |||||||||||||
3 | 1b35B | 0.18 | 0.17 | 0.97 | 3.15 | HHpred | -VHFVSEGVTPREDRIHSIKDFLSRPIIIATNLWSVSDPVEKQLYTANFPEVLI-SNAMYQDKLKGFVGLR-ATLVVKVQVNSQPFQQGRLMLQYIPYAQYMPNINETLQGRSGCPRTDLELS--VGTEVEMRIPYVSPHLYYNLIT-GQGSFGSIYVVVYSQLHDQVSGTGSIEYTVWAHLEDVDVQYPTGANIFT | |||||||||||||
4 | 5aooC | 0.13 | 0.12 | 0.88 | 0.84 | DisCoVER | ---------------VRDWLEFAHRPGLMATVPWTMADEPAERLGIFPVSPSIAGTGAPISYVISLFSQWR-GELAAHLLFTGSAQHYGRLVVCYTPAAPQP--PSTMQEAMR-GTYTVWDV-NAA-STLEFTIPFISNSYWKTVDVPDLSTTGYVSIWVQNPLVGPHTAPASALVQAFISAGEFNVRLMQ--NPA- | |||||||||||||
5 | 4qpgC | 0.17 | 0.17 | 0.96 | 0.35 | MRFsearch | -QEDWKSDPSQGGGKITHFTTWTSIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMITALASICQMFCFWRG-DLVFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDIAGV-QSTLRFRVPWISDTPYRVNRKGEYTAIGKLIVYCYNRLTSPSNVAHHVRVNVYLSAINLECFAPLYH---- | |||||||||||||
6 | 5oypB | 0.12 | 0.12 | 0.99 | 1.96 | SPARKS-K | RDQQQTVSENIPSTVGDLVIALTNRWMPINSIRVTVNGKRNDLLAQYYIPEDFLSTHAKCAPNTIPFETYVYYELEMKFVANGNKFQCGKVIISVKFDSYQADNINTGFQAALSRPHIMLDLS--TNNEGVLKIPFRYHRAFVRNQTHRPGKFASIYVQVLSPLQTGEGGANDMFIRPFYRYTRAEFAGMSYKVPLT | |||||||||||||
7 | 5g52B | 0.16 | 0.14 | 0.87 | 0.63 | MAPalign | -------------------DDYTSRWYQIAEFVWSKDDPFDKELARLILPRALLICDVPNTIPFKVHAYWR-GDMEVRVQINSNKFQVGQLQATWYYSDHLNISSKRSVYGFSQMDHALISAS--ASNEAKLVIPFKHVYPFLPTWTTGILDMGALNIRVIAPLRMSATGPTTCNVVVFIKLNNSEFTGTSSG---- | |||||||||||||
8 | 4qpgC | 0.17 | 0.17 | 0.99 | 0.46 | CEthreader | DQEDWKSDPSQGGGIKITHTTWTSIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTTALASICQMFCFWR-GDLVFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDIAG-VQSTLRFRVPWISDTPYRVNQKGEYTAIGKLIVYCYNRLTSPSNVAHHVRVNVYLSAINLECFAPLYHAMDV | |||||||||||||
9 | 4qpgB | 0.14 | 0.14 | 0.95 | 1.68 | MUSTER | VGSHQIEPLKTSVDKPGSKKTQGEKFFLIHSARWLTTHALFHEVAKLDVVKLLYNEQFAVQGLLRYHTYARFG-IEIQVQINPTPFQQGGLICAMVPGDQSYGS----IASLTVYPHGLLNCNINN--VVRIKVPFIYTRGAYHFKDPQ-YPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLTPLST-- | |||||||||||||
10 | 3napC | 0.15 | 0.14 | 0.98 | 1.46 | HHsearch | YGNEVILKTPFAGTS-SDEMAVLKIPNYFSRFKYSSTSLPKQVLWTSPVHPQIIRNHTLLAYATGFFKYWR-GGLVYTFRFVKTNYHSGRVQITFHPFVGYDDVMDGKIVRDEYVYRVVVDLR--DQTEATLVVPFTSLTPYKVCADVDQFFTGTLCVSALTPLVSSSAVSSTIDVLVEVKSDDFEVAVPNTPLWLP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |