>PF12262 (241 residues) KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRAS MNTMDGWSTSMPIVLNFKGDGFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDY VVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIGTSSSYAVAKSKQVKYESGDL ASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTI Y |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRASMNTMDGWSTSMPIVLNFKGDGFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDYVVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIGTSSSYAVAKSKQVKYESGDLASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTIY | |||||||||||||||||||
1 | 3vaeA1 | 0.11 | 0.05 | 0.50 | 0.78 | DisCoVER | ------YTL-NATHLTMPYV---------MPGDG------------------------------EVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPV------------EGAFYWL----NN--REVRWRPEHFWKPGTAVDVAVNTGVDLGEGMFGED-------------------------------------------NVQTHFTIG--GDW---NIPW------DQWRAGNA-- | |||||||||||||
2 | 3weuA | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | ------------ALSVHPSI--------GVARL------------GGLPYEH-PTT-TVV-NFKD--GIRRQGQVFKVFLNIEW-TV---HLANKKAEFRELNGYVPWRQLIIDLRISSGTLRTDQRLIVLGGYGFAGL-DDISDGSV--TCVVSETSTAWMLSDTCFDVGRDAQVGLPMCPMTWSLQNVIERDECEEETGCEPGDLTKMWQFMVEHWS---------------------- | |||||||||||||
3 | 2ra1A3 | 0.12 | 0.05 | 0.40 | 0.49 | CEthreader | ----------------------------------------------------------TPKVESVSAIDSTSFKVTFTKPVDKATAIPKNFSITLKGT-------------ETKLYPKSVEVSESGLTATVTLYDTLVDGKTYTVVTSG-LKDTAGKEFETSTNEFTYN------------------------------------------------------------------------ | |||||||||||||
4 | 5xcrE | 0.06 | 0.03 | 0.54 | 0.62 | EigenThreader | -----------RTQTVVTQES-----------ALTTS-----------------------------PGETVTLTCRSSTGAVTTSNY--ANWVQEKP----------DHLFTGLIVGPRFSGSLIEDKAALTITGAQT-EDEAIYFCA--LWYSNHWVFGGG--------------------------------------------TKLTVLGGTVEDLQKRLLALDPMCEQEIEEIRQKY | |||||||||||||
5 | 4hu2A | 0.14 | 0.08 | 0.59 | 0.58 | HHpred | -VTAADGLVNDNGRPVAGRLSPDG---LRWSTTEQLGYNRRYTLNATALGQTSPAHLMPYVMPGDVVGVGEPVAIRFDEN-IDRGAAEKAIKITT-N-P---------PVEGAFYW-------LNNREVRWRPEHFWKPGTAVDVAVNYGVDLGEGMFGEDNVQTH--------------------------------------------------------------------------- | |||||||||||||
6 | 3vaeA1 | 0.12 | 0.05 | 0.43 | 0.48 | MRFsearch | --------------------------------TMPYVMPGDGEVVG----------------------VGEPVAIRFDENIADRGAAEKAIKITTN-----------PPVEGAFYW-------LNNREVRWRPEHFWKPGTAVDVAVNTGVDLGEGMFGE-------------------------------------------DNVQTHFTIGGDWNIP---------------------- | |||||||||||||
7 | 5v4fA | 0.15 | 0.07 | 0.46 | 0.53 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------NRRVINPETYPSVPFGF----SHAVEQLSGRTLHIAGQVAWNANGELVGGQDLLAQTQQVLANLKEVLRYAGATPADVVRLRTYVVNHSPANLAAICAQIGAFYEGADPAANSF- | |||||||||||||
8 | 1uf2T | 0.10 | 0.09 | 0.88 | 0.55 | SPARKS-K | VPMSDTVRQLNNLSLQ------PSAKPKLYERQNAIMKGLDIKLFRSVAGQTGNIPMMGILATPPAFFVAERILFGISNAAIPAGSVVTGAYVYFIAGVTATATAADAATTFTVPTDNNLPVQTDSGNINLELGVAK---TGFCVAIEGEFTILANR----SQAYYTL--NSITQTPTSIDDVSDFLTTFLSQLRACG--------------QYFSDAMDQLTNSLITNYMDPPAIPAGLA | |||||||||||||
9 | 4ragA | 0.10 | 0.04 | 0.41 | 0.49 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------EVHDIERSEEDDQFIILACDGIWD----VMGNEELCDFVRSRLE------TDDLEKVCNEVVDTCLYKGSR-DNMSVILICFPNKVSPEAVKKEAELDKYLEC---RVEEII | |||||||||||||
10 | 3weuA | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | ------------ALSVHPSIGVPEIGGLPY--------------------------T--NF-KD--GI-RRQGQVFKVFLTLNIEWT--VHLANKKAWYEFRGYVPWRNLIIDLGRISSGTLRTDGRLIVLGG-YGFAGYDDISDGSV-TCVVTYSETSTAWSTCFDVGVRNFLDAQVGLPMMTWSLQN-IY-LTPEREETGCEPGDLTMWQFMVEHALNHELFDF--------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |