Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GPTSDNLSIIQKPGYEMVTQGERWELGLGAEQKLYVNVNNVKAATGFDKATLQVINPDNSVYSITDMDYDSGSSSLSAPWTLGDRKKASWMPNSDADVEYRFRVTLYDKAGSRKVLPDQKFVFDN |
1 | 3eifA2 | 0.11 | 0.10 | 0.91 | 1.17 | DEthreader | | LSALEKTALTTESNPE-AGHRHYAAISPNGGDYVQFQGT-FLR--NAKNLVAEVLDKEGNVVWTSVTEQVVTLSTRFTRWDGK----DK-GKVV-VNGTYTYRVRYTPISGAEQHT-DFDVIVDN |
2 | 3eifA | 0.09 | 0.09 | 0.93 | 1.17 | DEthreader | | LALEKPTALTTESNTIFAGIKPYAAISPNGDDYVQFQGT-FLR--NAKNLVAEVLDKEGNVVWTSVTEQVVTLSTRFTRWDG--KD--KDGKVV-VNGTYTYRVRYTPISGAEQHT-DFDVIVDN |
3 | 3eifA | 0.09 | 0.08 | 0.91 | 1.17 | DEthreader | | LSALEKPTALTTEETIFAGHRKYAAISPNRD-YVQFQGT-FLR--NAKNLVAEVLDKEGNVVWTSEVTQVVTLSTRFTRWDG-----KDK-GKVVVNGTYTYRVRYTPISSAEQHT-DFDVIVDN |
4 | 3eifA | 0.09 | 0.09 | 0.93 | 1.17 | DEthreader | | NLSLEKPTALTTESNPIAGHRKYAAISPNGGDYVQFQGT-FLR--NAKNLVAEVLDKEGNVVWTSVTEQVVKTSTRFTRWDGK----DK-GKVV-VNGTYTYRVRYTPISGAKEQHTDFDVIVDN |
5 | 3eifA2 | 0.09 | 0.09 | 0.93 | 1.17 | DEthreader | | LALEKPTALTTESNTIFAGIKPYAAISPNGDDYVQFQGT-FLR--NAKNLVAEVLDKEGNVVWTSVTEQVVTLSTRFTRWDG--KD--KDGKVV-VNGTYTYRVRYTPISGAEQHT-DFDVIVDN |
6 | 3c12A | 0.15 | 0.13 | 0.86 | 0.40 | HHpred | | ----QVLKGAALVGHNVLVPSAQVAIDATGSAKGVVAAT---SA---GFVNFEITDANGTFVKQLSVPA-SAAGEVSFAWDGTD-ANGNRMA----AGKYGITATQTDTAGAKSKLATYVDAP-- |
7 | 2xwxA2 | 0.13 | 0.10 | 0.76 | 0.43 | DisCoVER | | PE-YS-LTV---S-G--L----AKEYEIPIQLDLTLEAQ-G-----EMSAELTVYNHHQKPLASWSQAM---TDGELKSITL-----ELSEA---KAGHHMLVSRIKDRDGNLQDQQTLDFMLV- |
8 | 2xwxA2 | 0.13 | 0.08 | 0.62 | 0.42 | MRFsearch | | ------------------------------PIQLDLTLEAQ----GEMSAELTVYNHHQKPLASWSQAMTDELKSITLELSEA------------KAGHHMLVSRIKDRDGNLQDQQTLDFMLV- |
9 | 4xedA | 0.13 | 0.10 | 0.74 | 0.74 | SPARKS-K | | PPNIPNVTGPTNG---------------NIGTTYNYTFVT-TDPNG-DNITYYIEWGDGFTEEWIGPYASGEEVIFSHTW--------------DKKGTYVVRAKAKDILNYESSWGTLEVTPK- |
10 | 4u33A | 0.14 | 0.11 | 0.82 | 0.50 | MAPalign | | RVEIDDVAP--------VVSCGPAKAV--VGEVVPVSAAVWREGHEAVAATLVVRYLPHKPL-LIPMTSGQEPFVFHGQFT------------PDRVGLWTFRVDGWGTRDLVTRGEQFGVWVDR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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