Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | NMAADDTKYVDGEVVRAGPEGSHGTGAFSSGRGGAGNIADADSQPAPRADKDIVPEEACRPSTEGQDYHVGRGGAGN |
1 | 2pffB | 0.41 | 0.12 | 0.29 | 1.12 | MRFsearch | | --------------------------GFKQGGGGGGG-----------------------------GGGGGGGGGGG |
2 | 3bogA | 0.21 | 0.21 | 0.97 | 1.17 | SPARKS-K | | CKGADGAHGVGCPG-TAGAAGSVGGPGCDGGHGGNGGNGNPGCAGVGGAGGASGGTGVGGRGSGTPKGADGAPGAP- |
3 | 3tiqA3 | 0.13 | 0.06 | 0.49 | 0.71 | DisCoVER | | -----------ETI------------APGHRDEFDEVPGKP---GI------KNPEDVVR-----PPVDSVTKY-G- |
4 | 6vg3A1 | 0.08 | 0.08 | 0.94 | 0.57 | CEthreader | | -----KMHFPRSSLQPITTLGKSEFGEVFLAKETLVLVKSLQSKDEQKLNHANVVRLLGLCREAEPHYMVLEYVDLG |
5 | 1ml5Z | 0.12 | 0.12 | 1.00 | 0.63 | EigenThreader | | DALEEKLAQLEFRRMFSGEYDSADCYLDIAGSGGSFSSAEVDDDIDIDRSQHKNKDQAMLEMQKKNAEKQDIGWGSQ |
6 | 1lnzA | 0.21 | 0.18 | 0.87 | 0.24 | HHpred | | ------TKQVIADLTEHGQR----AVIARGGRGGRGNSRFATPANPAQLSENGERYIVLELKVLADVGLVGFPSVGK |
7 | 5o60M | 0.32 | 0.09 | 0.29 | 0.55 | MRFsearch | | --------------------------KTRVGRGEGSK-----------------------------GKTAGRGTKGT |
8 | 4om9A4 | 0.14 | 0.14 | 0.99 | 0.28 | FFAS-3D | | TLTVDELTTSNSAFVMRTNTQQADQLIVKNKLEGANNLLLVDFIEKKGNDKNLNIDLVKAPETSKDVFKTETQTIG- |
9 | 3boiA | 0.25 | 0.22 | 0.87 | 1.08 | SPARKS-K | | CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGGGAGASGGTGVGGRGGKGGSGTPKGADGAPGAP---------- |
10 | 5gwnA | 0.44 | 0.09 | 0.21 | 0.76 | CNFpred | | -------------------------RVFSWGFGGYGRLGHA------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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