>PF12183 (231 residues) EVFGHPVTDASSRADRYRSQRLCPFNNKVPNCTKDKAKSPLGVCSIQHDGSPVITCPIRF REDWLITDDAASFFFPEGTKWSSLTEIRLNDGNGKSAGNIDIVLVAYDDNGKVKDFGALE IQAVYISGNVRDPFEYFMEEPKGRAFMDWSNQPNYPRPDYLSSSRKRLVPQLFFKGGILH SWKKKSAVALNKSFFDTLPPLTTVSRKKADIAWLIYDIELCGSGAEKRYRL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EVFGHPVTDASSRADRYRSQRLCPFNNKVPNCTKDKAKSPLGVCSIQHDGSPVITCPIRFREDWLITDDAASFFFPEGTKWSSLTEIRLNDGNGKSAGNIDIVLVAYDDNGKVKDFGALEIQAVYISGNVRDPFEYFMEEPKGRAFMDWSNQPNYPRPDYLSSSRKRLVPQLFFKGGILHSWKKKSAVALNKSFFDTLPPLTTVSRKKADIAWLIYDIELCGSGAEKRYRL | |||||||||||||||||||
1 | 3c25A | 0.21 | 0.20 | 0.96 | 1.33 | DEthreader | EFFGHRVVVSTEAARNDQATGTCPFLTVETSCV-KAET-SRGVCVVNTARYDWLVCPNRAL-DPLFMSAASRKLFYEPHVVAYFQELSISKTDSSPEFSFDWTLAEVESIPKIKRYGVLEIQTMDFHGSYKHAVGAIDIAFWAGRAALS-KK--MEGPN-LSNVFKRTFYQMAYKFALSGHQRCGTGFAIPQSVWKSWLPLLGDTRNDSEAWIFVFELDPDTD-A-SPRPL | |||||||||||||
2 | 3c25A | 0.21 | 0.20 | 0.93 | 1.17 | DEthreader | EFFGHRVYEVVSEARNDQATGTCPFLTVETSCV-K-AETSRGVCVVNTARYDWLVCPNRALD-PLFMSAASRKLFYEVHVVAYFQELSISKTDSSPEFSFDWTLAEVESIPKIKRYGVLEIQTM-DF-HG--SYKHAVGAIAAASKKME-------GP-NLSNVFKRTFYQMAYKFALSGHQRCGTGFAIPQSVWKWLLPSLGDTRNDSEAWIFVFELDPDTD-ASPRPLA | |||||||||||||
3 | 3c25A | 0.21 | 0.19 | 0.92 | 4.71 | HHpred | EFFGHRVYVSTEAARNDQATGTCPFLTTS--CVKAETSR--GVCVVNTAVYDWLVCPNR-ALDPLFMSAASRKLFGYGPTIALGGELSISKTDSSPEFSFDWTLAEVESIPKIKRYGVLEIQTMDFHGSYKHAVGAIDIGIKKMEGPNLSN------------VFKRTFYQMAYKFALSGHQRCATGFAIPQSVWKSWLRLATLDNGDGTFWIFVFELDPDTDA--SPRPL | |||||||||||||
4 | 3c25A | 0.16 | 0.16 | 0.98 | 2.32 | DisCoVER | EFFGHRVYVSTEAARNDQATGTCPFLTAAKETSCVKAETSRGVCVVNTARYDWLVCPNRALDPLFMSAASRKLFARGVHVVAYFQELSISKTDSSPEFSFDWTLAEVESVPKIKRYGVLEIQTMDFHGSYKHAVGAILIDFHWLPGRAA--LSKKMEGPNLSNVFKRTFYQMAYKFALSGHRCAGTGFAIPQSVWKSWLRHLATRNDSENAWIFVFEL-DPTDASPRPLA- | |||||||||||||
5 | 3c25A | 0.19 | 0.19 | 0.97 | 2.22 | MRFsearch | EFFGHRVYPSTEAARNDQATGTCPFLTAETSCVKAET--SRGVCVVNTARYDWLVCPNRALD-PLFMSAASRKLFGYGHVVAYGGELSISKTDSSPEFSFDWTLAEVESIPKIKRYGVLEIQTMDFHGSYKHAVGAIDIALVEGI-DFHGWLPTPAGRAALSNVFKRTFYQMAYKFALSGHQRAGTGFAIPQSVWKSWLRHPTLIDNSENAWIFVFELDPD--TDASPRPL | |||||||||||||
6 | 3c25A | 0.18 | 0.18 | 0.98 | 2.03 | SPARKS-K | EFFGHRVYVSTEAARNDQATGTCPFKLVETSCVKAETSR--GVCVVNTARYDWLVCPNRALD-PLFMSAASRKLFGPTEPLQFIAELSISKTDSSPEFSFDWTLAEVEPVPKIKRYGVLEIQTMDFHGSYKHAVGAIDIALVEGIDFHGWLPTKKMEGPNLSNVFKRTFYQMAYKFALSGHQRAGTGFAIPQSVWKSWLRLGDTRNDSENAWIFVFELD--PDTDASPRPL | |||||||||||||
7 | 3c25A | 0.18 | 0.17 | 0.97 | 1.47 | MAPalign | EFFGHRVYPSTEAARNDQATGTCPFLTVETSCVKAE--TSRGVCVVNTERYDWLVCPNRALD-PLFMSAASRKLFRGVHVVAYFQELSISKTDSSPEFSFDWTLAEVEPVPKIKRYGVLEIQTMDFHGSYKHAVGAIDIPTPAGRAA----LSKKMEGPNLSNVFKRTFYQMAYKFALSGHQRCGTGFAIPQSVWKSTFSLGDTRNDSENAWIFVFELDPDTDASPRPLAP | |||||||||||||
8 | 3c25A | 0.18 | 0.17 | 0.99 | 2.08 | CEthreader | EFFGHRVVVSTEAARNDQATGTCPFLTAETSCVKAETS--RGVCVVNTAVYDWLVCPNRALD-PLFMSAASRKLFGGVHVVAYFQELSISKTDSSPEFSFDWTLAEVESIYKIKRYGVLEIQTMDFHGSYKHAVGAIDIAGWLPTPAGRAALSKKMEGPNLSNVFKRTFYQMAYKFALSGHQCAGTGFAIPQSVWKSWLRLGDTRNDSENAWIFVFELDPDTDASPRPLAP | |||||||||||||
9 | 3c25A | 0.21 | 0.20 | 0.97 | 1.39 | MUSTER | EFFGHRVYVSTEAARNDQATGTCPFKLVETSCVKAETSR--GVCVVNTARYDWLVCPNRA-LDPLFMSAASRKLFGYGPT-KLGGELSISKTDSSPEFSFDWTLAEVEPVPKIKRYGVLEIQTMDFHGSYKHAVGAIDIAVEGIDFHGWLPTPKKMEGPNLSNVFKRTFYQMAYKFALSGHQRCATGFAIPQSVWKSWLRLGDTRNDSENAWIFVFELDPDTDAS--PRPL | |||||||||||||
10 | 3c25A | 0.21 | 0.19 | 0.92 | 7.62 | HHsearch | EFFGHRVYVSTEAARNDQATGTCPFLTTS--CVKAETSR--GVCVVNTAVYDWLVCPNR-ALDPLFMSAASRKLFGYGPAATLGGELSISKTDSSPEFSFDWTLAEVESIPKIKRYGVLEIQTMDFHGSYKHAVGAIDIGIKKMEGPNLSN------------VFKRTFYQMAYKFALSGHQRCATGFAIPQSVWKSWLRLATLDNGDGTFWIFVFELDPDTDA--SPRPL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |