Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MGAVNTRNGTLQIDFRYQGERCREQTRLTDTPSNRKRAKKILERIEAEITLGTFNYRDYFPKSK |
1 | 6sy0A | 0.12 | 0.11 | 0.89 | 1.17 | DEthreader | | EPVILIDERCLVVEWYENNIRREQRISYKGNDKAKLRAKELIEKLKS-G----ITFEQLYDK-- |
2 | 6sy0A | 0.12 | 0.11 | 0.91 | 1.17 | DEthreader | | EPVILIDKRCLVVEWYENNIRREQRISYKGNDKAKLRAKELIEKLKS-G---IT-FEQLYDKG- |
3 | 6sy0A1 | 0.10 | 0.09 | 0.94 | 1.17 | SPARKS-K | | EPVILIDERCLVVEWYENNIRREQRISY--KKYGNDKAKLRAKELIEKLKSGI-TFEQLYPDK- |
4 | 6sy0A | 0.12 | 0.11 | 0.92 | 1.17 | DEthreader | | EPVILIDIRCLVVEWYENNIRREQRISYKGNDKAKLRAKELIEKLKS-G----ITFEQLYDKGP |
5 | 6sy0A1 | 0.12 | 0.11 | 0.89 | 1.17 | DEthreader | | EPVILIDERCLVVEWYENNIRREQRISYKGNDKAKLRAKELIEKLKS-G----ITFEQLYDK-- |
6 | 2qgyA1 | 0.08 | 0.08 | 0.97 | 1.17 | DEthreader | | RLKIWITTKFIIIKITTEGIEGWGEAFSINF-REKGIAIIIKELFREISNIPNLS-IKFEIWDL |
7 | 3ju0A | 0.05 | 0.05 | 0.94 | 0.44 | HHpred | | GFGMHLLSKYWRLSYRFEKKQRLLALGVYPA-VSLADARQRRDEAKKLLAAGI-DPSAKKQA-- |
8 | 6sy0A1 | 0.12 | 0.11 | 0.88 | 0.83 | DisCoVER | | EPVILIDERCLVVEWYENNIRREQRISYKKNDKAKLRAKELIEKLK-----SGITFEQLYP--- |
9 | 3jtzA | 0.14 | 0.11 | 0.77 | 0.67 | MRFsearch | | --GLYLLSRHWYLKYRISGKESRIALGAY-PAISLSDARQQREGIRKMLALN------------ |
10 | 3eo3A1 | 0.08 | 0.08 | 1.00 | 0.90 | SPARKS-K | | ALAVDLGGTNLRVAIVSMKIVKKYTQFNKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|