>PF12118 (305 residues) SPVNQGSDARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQ GDGGGGSNAVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFS EQKVARQQVEQDSNAQAMARENDIERREQVKIRQQEMEVRQLEARQAEVLAHERAHAAVG GQFARAPNFEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVYAAAMAPVNPSQA DLRVAAEALRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNL DKSGA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SPVNQGSDARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSNAVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQVEQDSNAQAMARENDIERREQVKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPNFEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVYAAAMAPVNPSQADLRVAAEALRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGA | |||||||||||||||||||
1 | 4uavA | 0.07 | 0.03 | 0.39 | 0.77 | DisCoVER | -TLPSALLFDCDGVKVAVCSTSNEVSIVKIKIFAGDVVPKKKPDPAIYNLAATLVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKST-EDFENAD-AV----------------------------------------------------------------------------------------------------------------FDCIGDPPEER------------------------------------------------------------------FDLAFCGSLLRKQ------ | |||||||||||||
2 | 4iggA | 0.08 | 0.06 | 0.71 | 0.67 | DEthreader | VGQGGGG-YLNNFDKQIIV---------------ERLESIISGA-LMIECVRALDKMT-----KKTRDLRRQ-LRKAVM---------SISNNEEGVKLVRMSASQLEALCQVLFQWEKQVRVLTDAVDDTSIDDFLAVYRKAVLMI---R------P---------QSARAIM--L---K--IAEQVA-----------F--QEEKSLDVSKWSIVLAKQMCMIMMEMT------NTSDVISAAKKIAEAGSR-MDKLGRTIADHCPDSACKQDLLYQKASYVSTLNLPAVSW----------- | |||||||||||||
3 | 2ce8A | 0.09 | 0.08 | 0.92 | 0.49 | CEthreader | AVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA--STLSIWDLAAPTPRIKAELTSSAPACYA---------------LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY--QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY----- | |||||||||||||
4 | 4lglA | 0.10 | 0.10 | 1.00 | 0.53 | EigenThreader | GAVYDYQALVTLAADPLSLTLLTPPGELGADIAVGSTQRFGIPHAAYFTKAEYQRKMPGRSNICTAQVLLAVMASMYGVYHGSTGLKNIALRIHQLTVLLAIGLKRLWQVFAGKDNLPFTPEELWSEVTELLRYLHQLESKEFGKIGYQILFAQLEAWLGEITGSQGEYAGLQVIRQYHLSRGEEQRNICLIPESAHQVVPVKRLAALMVTYPSTHGVANMNAQHLQAFLSAAPYGSASILVISWMATEVAILSANYMAKRLENAPHTAQSLICAAYPAPWTKQFKFWPAVGRINNGDRHLVCSE | |||||||||||||
5 | 2bydA | 0.09 | 0.04 | 0.44 | 0.29 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------SRAEWLLAVRSIQPEEKERIGQFRDAKAAMAGRLMIRKLVAEKLNIPWHIRLQRTAKGKPVLAKLQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEKDEWTQLDM--------FYRNWALKESFIKAIGVGLGFELQRLE------------------------- | |||||||||||||
6 | 5cwiA2 | 0.16 | 0.06 | 0.36 | 0.60 | MRFsearch | --------------------------------------------------------------------------------------IAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEHPNADIAKKCIKAASEAAEEASKAAEEAQRHP----------------------------------------------------------------------DSQKARDEIKEASQKAEEVKERCE-------------------------------------- | |||||||||||||
7 | 2tmaA1 | 0.15 | 0.07 | 0.47 | 0.77 | FFAS-3D | ------------------------------------------------------------------------------MQMLKLDKENALDRAEQAEADKKAAEDRSKQLE-----DELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAE-ADVASLNRRIQLVEEELDRA--------------------------------------QERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEA--------------------------------------- | |||||||||||||
8 | 6yvuB | 0.05 | 0.05 | 0.94 | 1.04 | SPARKS-K | LRQFNLQPISTPENVPRLFDLVKPK-NPKFSNAFYSVLRDAYGKKRFRVVTVDGKLIDISGTGNHVAKGLMKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSLERLRGEYNDLQSETKTKKEKIKGLQDEIM------------------KIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDNMNETLNLKVELKEQSEQLK | |||||||||||||
9 | 5v5sA | 0.09 | 0.03 | 0.34 | 0.47 | CNFpred | -----------------------------------------------------------------------------------ENLMQVYQQARLSNP--------------------------------------------------------------ELRKSAADRDAAFEKINEARSPL-LGADYTYSNGNGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY--QTDQQTLILNTATAY----------------------------------------------------- | |||||||||||||
10 | 1ciiA | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | --QLTQQKNTPGKTIVSPEKFPGR-----------VIDNRANLNYLL-----------GLDYKRNILN----------EVAEWD-KL-RQRLLDARNKITSAESAVNSAR---NNLSARTNEQKHANDALNALLKEKENIRNLGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSYGKAQLAEMAGQAKG---------KKIRVAYYRINKKINAKDRAAIAALEVKLISNLNGKFTSLADWITEFGKAVRTE--------------------------IL-GS------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |