>PF12099 (182 residues) LFVILLFIGISLPAQNVAVKTNLLYDATATLNLGAEIGLAPRWTLDLSANYNPFSFSDNR KWKHWMAQPEARYWFCERFNGHFMGLHLLGGQYNVGNVKFPLGILPSTEDYRYEGYYYGV GLSYGYQWVLGRRWSIEASLGLGYVRAHYDKYDCPKCGEWKEKGDKNYLGVTKAAISLIY VI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LFVILLFIGISLPAQNVAVKTNLLYDATATLNLGAEIGLAPRWTLDLSANYNPFSFSDNRKWKHWMAQPEARYWFCERFNGHFMGLHLLGGQYNVGNVKFPLGILPSTEDYRYEGYYYGVGLSYGYQWVLGRRWSIEASLGLGYVRAHYDKYDCPKCGEWKEKGDKNYLGVTKAAISLIYVI | |||||||||||||||||||
1 | 1i78A | 0.05 | 0.05 | 0.91 | 1.17 | DEthreader | -----------PD-NINADISLGTLSNNAIIKGAINWDLMPQISIGAAGWTTSRGGNPDTQLYANEFDLNIKGWLLNEPYRLGLMAGYQESRYSFTARGGSYIY-FPERAIGYKQRFKMPYIGLTGSYRYED-FELGGTFKYSGVESSDNDEHYDP--RITYRSKVKQNY-YSVAVNYLKYT | |||||||||||||
2 | 1i78A | 0.07 | 0.07 | 0.91 | 1.17 | DEthreader | ------------TPDNINADISLGTLSNAIIKGAINWDLMPQISIGAAGWTTSRGGNPDTQLYANEFDLNIKGWLLNEPYRLGLMAGYQESRYSF-TARGGSYI-SFERAIGYKQRFKMPYIGLTGSYRYED-FELGGTFKYSGVESSDNDEHYDP--RITYRSKVKQNYYSVAVNAYKYTF | |||||||||||||
3 | 2x27X | 0.12 | 0.11 | 0.92 | 1.01 | DisCoVER | ------IQGHKA--GDFIIRGGFATVDSDQLGLTFTYMFADKWGVELVAATFNHQVDKLADIKQLPPTLLLQYYPMGGAFQPYGGLGVNYTTFFDEDLARK--AQ--GFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDV-DPWVYMIGFGYK- | |||||||||||||
4 | 2f1tA | 0.10 | 0.09 | 0.91 | 1.12 | SPARKS-K | ------------EAGEFFMRAGSATVRPTQLGLTFTYMATDNIGVELLAATHKIGTRATGDIATVHHLLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGG-----AQQHDSVRLDPWVFMFSAGYRF | |||||||||||||
5 | 2f1tA | 0.12 | 0.10 | 0.90 | 1.74 | HHsearch | ------------EAGEFFMRAGSATVNNTQLGLTFTYMATDNIGVELLAATPFHKIGRIATVHHLPPTLMAQWYFGSSKFRPYVGAGINYTTFFDNGFNDHGK--EAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAN---YKLGGA--QQHDSVRLDPWVFMFSAGYRF | |||||||||||||
6 | 3dzmA | 0.10 | 0.09 | 0.87 | 1.17 | DEthreader | ----------HAAK-FSVEAGAGFY-GFGG-QLAVVAELALPLGVRLGVGFATS---FSEWGQNVTLSLDVLYKPSGLPVEVAPYFGVRYNFFSGGYTDP------TIKAQTISSNQLGLGLGVRAAYPLMPNLSLVGDLGVDYYFQAFTRVEEDGNKSQSSVCPNPEWVLK-LRLGAAYRF | |||||||||||||
7 | 2x4mA | 0.09 | 0.08 | 0.90 | 1.17 | DEthreader | ------------NISSFTVAAST-GMLSNILKGDISWDPYSFLTLNARGWTSAGSGNPATNVHANEYDLNVKGWLLQENYKAGITAGYQETRFSWTATGGSYSY-NFVRVIGYNQRFSMPYIGLAGQYRIN-DFELNALFKFSWVRAHDNDEHYM---DLTFREKTSSRY-YGTVINAGKYR | |||||||||||||
8 | 1k24A | 0.09 | 0.08 | 0.87 | 1.17 | DEthreader | ------------Q-TANEFTVHT-DLSAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINPENRIDLYTGYTYTQTLDSLNFRVGAGLGFESSKD-SIK------TTKHTLHSSRQSWLAKVHADLLSQLGNGWYINPWSEVKFDNSRYKLNTGVT--KKDINQKTNGWG-FGLGANEGIKF | |||||||||||||
9 | 2x27X | 0.10 | 0.09 | 0.96 | 1.01 | SPARKS-K | -------DIQGHKAGDFIIRGGFSSDIKLQLGLTFTYMFADKWGVELVAAHQVDVKGLLDDIKQLPPTLLLQYYPGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGV-NKTKVDVDVDPWVYMIGFGYKF | |||||||||||||
10 | 2x27X | 0.10 | 0.09 | 0.92 | 1.69 | HHsearch | ----------DIQGHDFIIRGGFATDSDTQLGLTFTYMFADKWGVELVAATPFNQVDKLADIKQLPPTLLLQYYPMGSAFQPYGGLGVNYTTFFDEDLASNRKA--QGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSLGVNK--TKVDVDVDPWVYMIGFGYKF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |