>PF12090 (244 residues) DAIISKYEQFRPSFEFHIYENNYKICAPANTRLQQQQRTPQATSDGLILNKNNETLKEFL EYVARGRIPEAIMEVLKDCNIQFYEGNLILQVYDHTNTVDVKHTQKKPADSSAGASVPPQ AQSGTAPGSAAANTGSPTPSGTLQPSQTSGTDTSATSNDPAKPSEDKKETKEVVATFKRP RVYRTLLRPNGLTHYYDMLSYADHTRFSDNIYQQLEAEILTLTKRNLKLDVPLNPFEYRD MLDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | DAIISKYEQFRPSFEFHIYENNYKICAPANTRLQQQQRTPQATSDGLILNKNNETLKEFLEYVARGRIPEAIMEVLKDCNIQFYEGNLILQVYDHTNTVDVKHTQKKPADSSAGASVPPQAQSGTAPGSAAANTGSPTPSGTLQPSQTSGTDTSATSNDPAKPSEDKKETKEVVATFKRPRVYRTLLRPNGLTHYYDMLSYADHTRFSDNIYQQLEAEILTLTKRNLKLDVPLNPFEYRDMLDE | |||||||||||||||||||
1 | 6t9iB | 0.75 | 0.42 | 0.56 | 0.67 | DEthreader | DSILKKYEQYLHSFEFHIYENNYKICAPA-------------G-LI-LTK-NNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNT-----------------------------------------------------------------------------VDVRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLKRNLSLSV-------------- | |||||||||||||
2 | 5v9xA | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | -----------------PLPDEA-FANSLAERAHHGSVSKRVEVATSLELGID-VP-SVASGL-------IS-GVLF-PKHRTDLIGC-T-------V-QHVAVAEPVDA----DAWFDAVR-SAPFATL------PRSAFEATLDLLRPRLVY-DRDTG--TLTARPGAQRLAVTSGAIPDSVGRLGVGAFTELFDRCQGFAGYTDNLHQLLREQRETVVPSTFSPRL--------------- | |||||||||||||
3 | 6t9iB | 0.85 | 0.52 | 0.62 | 9.30 | HHpred | DSILKKYEQYLHSFEFHIYENNYKICAPA----------------GLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNTVDV-----------------------------------------------------------------------------RPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
4 | 4ny2A1 | 0.06 | 0.05 | 0.78 | 0.70 | DisCoVER | PKGT-IYL-TFDDGPVNTFY-FNAWHLNEDRALEALKLALDSGHIVGNHSYDH----MIHNCVGNHQIHSYQDPVRDALTLYLPTIR-SYPNYKGYELARL-----PYTNGWRFQADGLCATSDNLKPPPSNSVASIQV-------------------------------QNILAGYQTHG-WDVDWAPANSLLNNS--K--TQEFPC--GTPLHA-DKVIVLTHDFLFKRGMGATQNLPFDT- | |||||||||||||
5 | 6t9iB | 0.83 | 0.52 | 0.62 | 1.98 | MRFsearch | DSILKKYEQYLHSFEFHIYENNYKICAP----------------AGLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNTVD-----------------------------------------------------------------------------VRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
6 | 6t9iB | 0.81 | 0.50 | 0.62 | 1.78 | SPARKS-K | DSILKKYEQYLHSFEFHIYENNYKICAP----------------AGLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTN-----------------------------------------------------------------------------TVDVRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
7 | 3venA | 0.06 | 0.05 | 0.88 | 0.87 | MAPalign | ---------HMRVLGLNGWPHDASAALLVDGRIA----------AFAEEEKHGYNT--APVQA--------AAFCLAQAGLTVDDLDAVAFGWLAAHGTTVDETLSAFAFDSDGYRLNLIARDPEDWDEYSVTERAWFAHLERIYRLPPNEFVRRYDPAKGRVVRDTRRDPYEYRDLAATGVSGAAVLVRAAYAERLPSVVHEDWSTNPRYHRMLTELGDLVSFNDRGEPIVSSPADALLTFSR | |||||||||||||
8 | 6t9iB | 0.82 | 0.51 | 0.62 | 1.11 | CEthreader | DSILKKYEQYLHSFEFHIYENNYKICAP----------------AGLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNT-----------------------------------------------------------------------------VDVRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
9 | 6t9iB | 0.83 | 0.52 | 0.62 | 1.08 | MUSTER | DSILKKYEQYLHSFEFHIYENNYKICAP----------------AGLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNTVD-----------------------------------------------------------------------------VRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
10 | 6t9iB | 0.82 | 0.51 | 0.62 | 6.30 | HHsearch | DSILKKYEQYLHSFEFHIYENNYKIC--------AP--------AGLILTKNNETLKEFLEYVARGRIPDAIMEVLRDCNIQFYEGNLILQVYDHTNTVD-----------------------------------------------------------------------------VRPRVYRTLLKPNDLTTYYDMMSYADNARFSDSIYQQFESEILTLTKRNLSLSVPLNPYEHRDMLEE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |