Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VVKKQDEQEFVVECDGHEWVCRRAASCLLQPQVDDTVLISGPERERVYLIAVIEQAQQNESTVSVPGRLNISADSVNIHSTAAMQLRGGTALDINTAQLKLSAEKGQCVIDEMQYVGRELKTTVGMMRVIGKVYESIMDRLSFMSRTSFKLTEEVEHLRAGTIDYQAEQSARLHSKYTVVTAKDLVKVDGKQIHMG |
1 | 2n59A | 0.08 | 0.04 | 0.47 | 0.67 | DisCoVER | | --------------------------MVQ------CEVEAAVSGGHVTLQGVITAVR--DGAGSYKLAVDKAGAAGTSRIKQAGAF-----TAIAEQRVTVGNNRYAARL-DVSFGSVTIQCNLDPE-TVK--------------------------------------------LE------------------- |
2 | 2cqtA2 | 0.05 | 0.04 | 0.77 | 0.67 | DEthreader | | MFTQFADGSAYHQY-NDIGSGFNNRGGLPL-----DWNDCNCFTTENQAESIAQLYAEYAT--------------EARK----YVDE---VRAAVLEHGW-WFLRAYPVGIWQAYYQIELG---------EVSTYPYKENGGIFCHNNPWVII-ETVVG-----RGAQFDYKRIIAKNSLTGTAAWNFVAVSY--- |
3 | 6d69A | 0.07 | 0.07 | 0.97 | 0.70 | CEthreader | | IIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDKENHRVQKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDSEFKGLEGVAIMSNGNILVCDRENHRVQVF----- |
4 | 3ohmB | 0.08 | 0.07 | 0.92 | 0.72 | EigenThreader | | RNRVDPNGFYWTGPNMEVDTLDITGRYARLPKEKLMTVVSGPDPVNTVFLNFMA-VQDDLS-------------TDMTQPLSAYFINSSHNTYGTSRCVELDVWKSFENHVLVKNKKPVMSSFVETKAMEQLTKSPMEFVEYNKQQLRVKVISGQFDMFGLFPKVVLRIAAFEEG-GKFVGHRILPVCLRNEANQP |
5 | 6j0mA | 0.14 | 0.08 | 0.57 | 0.68 | HHpred | | VAKYDSAVRIPIILNNEFLWARLGSGFCFYPEPGDEVIIGFFEPRYPVILGAMHNPKNKAQQLVIDKMIRINAG-ENLQQDKDISLSTKKELTLKAQTMNATMDK------SLAMSGK------------------------------------------------------------------------------ |
6 | 3qr8A | 0.11 | 0.07 | 0.61 | 0.73 | MRFsearch | | IVETDLAGRCRVQTGGCTDWLQWLTRTWWAPSVGEQVLILAVGLDTAFVLPGIYSGSADALHIRFPDGAVIEYEALTVSGIKTASVTASGSVTATVPVVVKASTRVTLDTPEVVCTNRL----------------------------------------------------------------------------- |
7 | 3lycA2 | 0.12 | 0.07 | 0.60 | 0.59 | FFAS-3D | | --------------------------------------------------------------LAAAGSTHVNINSPLQAEEFEAGLAGSGIIQASFTNLKIEIASGDFVGHKVYCEELNGDAGSNTIVLGGT------------VGIAEFSIAGSGTVRAFECKIAGSGDIEAFVVNKIIAGSGSVKYKGD----- |
8 | 3jx8A | 0.11 | 0.10 | 0.89 | 0.82 | SPARKS-K | | EITFVGSADFEYEQKAPYLSVTIDENLFLVTEVGGTLKIYPKFNNNSYYKIKSNSKELK--ELNTVGSGSFIISKEINAGSGNVELRGPYKLECNAGSGNIIAKDIQLDNLSCSLASSEVIGTVDRASFNVAG-------------------SKAFDCQARKAECNIASEISVYATDANIVGSGEIHYKGDPEISK |
9 | 3lycA | 0.09 | 0.08 | 0.89 | 1.51 | CNFpred | | YTQSDAPEGLEIKTDREKYEFNVE---------NHKLKIRPK-PTEFMVTANSRN----LKKLAAAGSTHVNINS-PLQA-EEFEAGLAGSGIIQF-HDTASFTNLKIEIASGDFVGHKVYCEELNGDMAGSNTIVLG----GTVGIAEFSIAGSGTVRAFDCTMDELECKIAGSGDIEAFVVNKIKAEIGSVKYK |
10 | 4rlvA | 0.07 | 0.06 | 0.86 | 0.83 | DEthreader | | ----HDTLELHSVKLLLGPCAARSGHD---PLLASPL-----------HVECHLLKAPVDDALVAHCGHTANPNARTPHIACKKQAITESGLTIASPDVTALLGALVD---TPLHIASVTPLHISAPVAAKYPHVAAHPLHIATTPLHLSIHTSLHADQDAHTGANVNATP----I-NVLLAKPALAYISVVDTL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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