Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | WHQKWRRPLRDSLDWLRDQLVKVYEETGRKFFTDPWAARDEYIHVMLDRSPVNVNRFFARHQTRKLTGAEKVDALRLLEMQRHTLLMYTSCGWFFDELSRPEGTQILRYAARAIELAGDVAGVQLEKAFIRRLAAAPSNVEFFQNGAEVYRQLVIPAQVSMEQVAAHYAISSLFTSYSRDQRVYCYAVHQLDYQLQRLGNLTLAVGQIQLTSEITWESSHLIFAVLHLGGWDFHCCIRPFNGRRNYSQMKDSLFEALRQASAAQTILAMNRIFGDQSYSLQNLF |
1 | 4cmrA | 0.15 | 0.10 | 0.65 | 2.97 | HHpred | | VSQLWKFAF-KLFNRVRFGVIDL-RTQGVSDIEKIKEFREHYEYFELDTS----VDYV-E----PIHEA-DPSLALKLGRIYYLLLANHSCPRFWENIDRVTFGNVATISKALIELELYEENEERANYIFLEY--KLLAFPQWETTEKAWFESLRSEKYNVVTRAALYVGKRDLPPDRSVID-TLYD-----LEEAVP-----DTGHI------PGE------------------------------------------------------------------- |
2 | 4cmrA | 0.10 | 0.07 | 0.70 | 1.01 | SPARKS-K | | VSQLWKFAF-KLFRELNRAVRFGVITQGVSDIEKIKEFLVRYSRVFF-------REHYEYFTSVDYVEEADPSLALKLGRIYYLLLANHSCPRFWENIDRVTFGNVATISKALIELELYEENEERANYIFLEYKLLAKGLEGWETTEKAWFESLRSEKYNVVTRAALYVGKRDLPPDRSVAVPDTGHIPGEHGKWENKEWCEHKGKD----------------------------------------------------------------------------- |
3 | 4xl5C | 0.07 | 0.05 | 0.72 | 0.72 | DisCoVER | | -------------------------------------VEMYIKNLQ-DDSPPVRVYAAFALGK-------------IGDERAVEPLIKA-LK--DEDAS--VRYAAATALGQI-GD------ERAVEPLIK-ALKDEDGY----VRT-AAA-EALGQIGDERAVEPLIK-ALKDETAARALGEIGDEAVLIKALKD-EDPWVRLTAARALGQIG-DERAVLIALKDDASVRKAAAVALGQIGDERAVEPLIKA--LK--DEDEYVRQRAASALGKIGGERVR-- |
4 | 2cse1 | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | --SMFTRVAPEKFVLLNLAILQQAGLDPLYIRAMACTSGIQVQRRPRSGSKQDGLADGTAE--YFIFGC-RI-PN-LS--RHPIV-GKERA-SAEEPWP--AILDQIMGIFFNGVHDGLQWQRRYSWALCCAFS-RQRTMVGYLQ--YPMWSFVYWGLWYMPTG-L------HNPPS---------TRFAQTLFLLLRTLGAIQDVS-------------TVQLARV-----VNLAVDFDSMFKH-------------PPRM-GWL-RAILRFLGAGMFWM--- |
5 | 1m9iA | 0.09 | 0.09 | 0.97 | 0.49 | CEthreader | | ARVELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRSEISGDLARLILGLMPAHYDAKQLKKAMEGAGKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTS---------GHFRRILISLATGHREEGGENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGTDDKTLTRIMVSRSEIDLLNIRREF |
6 | 6ehqL | 0.06 | 0.05 | 0.91 | 0.68 | EigenThreader | | NIILAAHTTHDHIVHFYQLSALDWV-DITSALQAD--PTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASPPEVNLIAVAHYLQALECQRDANRVVALLGGDFVEQVYKVDTAVIAAFYKLNEIVAIYQKLTGNTSTLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPR-----GMLSHWMVIKDG---IINYQAVV-----PSTWNSGPRNFNDDVG-----PYEQSLVNKPLEVVRTIHS-----FDPCMACAV |
7 | 1k1yA | 0.10 | 0.08 | 0.77 | 1.62 | HHpred | | -IASYFE----MSEWLPAKQAKLFVEFVEQLKEEGK--FEKYRVFVRGGI---WKNFFFKYPESMLMVS--KAVRDNPEARKYILKAQCNDAYWHGVFGGIYVWENIIKAQRYLKPENKILDVDF-DGRAEMVENDGFIATKPHYGGSIFELSSKRKAVNYNDVLPRRQIRRELDWQL-RAILQPYEYEMIE------NGVKLWKIPARVEKKIELTGFIAKYRVLLEKPYKALFGVEI--------------------------------------------- |
8 | 4cmrA | 0.14 | 0.08 | 0.57 | 0.83 | MRFsearch | | -SQLWKFAFFRELNRAVRFGVIDLRTQGVSDIEKIKEFLEHYEYFELD----TSVDYVEPI------HEADPSLALKLGRIYYLLLANHSCPRFWENITRVTFGNVATISKALIELELYEENEERANYIFLEYKLLAKGLEGWETTEKAWFESLRSEVYNVVTRAALYVGKR---------------------------------------------------------------------------------------------------------------- |
9 | 4cmrA | 0.13 | 0.08 | 0.62 | 0.78 | FFAS-3D | | VSQLWKFAFKLFRELNRA-VRFGVIDLRTQGVSDIEKIKERYSRVFFREHYEYFELDTSVDYVEPIHEADPSLALKLGRIY-YLLLANHSCPRFWENIDTRVTFGNVATISKALIELE-LYEENEERANYIFLEYKLLALEGWETTEKAWFESLRSEVYNVVTRAALYVGKRDLPPDRS--------------------------------------------------------------------------------------------------------- |
10 | 6w2rA | 0.12 | 0.08 | 0.68 | 0.73 | SPARKS-K | | ---GTTEDERRELEKVARKAIEAAREGNT---DEVREQLQRALEIARESGTDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEES-------------NNSDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTTPDVIKLAIKLAKLAARAALEVIKRPKSE-------------------------------------------------------------EVNEKIVKAIQEAVESLREARVREAVERAEEV------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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